RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 ANKRD22Q5VYY1 191 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 TRIM68Q6AZZ1 485 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 LGI2Q8N0V4 545 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 FBXO25Q8TCJ0 367 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 SLC39A13Q96H72 371 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
SKA3-203ENST00000400018 RPRD1AQ96P16 312 aaPredicted RBP12.05□□□□□ -0.48
SKA3-203ENST00000400018 LRRC3BQ96PB8 259 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 TTYH1Q9H313 450 aaPredicted RBP12.05□□□□□ -0.48
SKA3-203ENST00000400018 ZDHHC4Q9NPG8 344 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 TP73O15350 636 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 AVILO75366 819 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 ECHS1P30084 290 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 CHKAP35790 457 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 GRIA1P42261 906 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 SKIDA1Q1XH10 827 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 DENND2CQ68D51 928 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 NAIF1Q69YI7 327 aaPredicted RBP12.05□□□□□ -0.48
SKA3-203ENST00000400018 BBS12Q6ZW61 710 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 ZNF572Q7Z3I7 529 aaPredicted RBP12.05□□□□□ -0.48
SKA3-203ENST00000400018 EGFL6Q8IUX8 553 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 GOLGA6L1Q8N7Z2 621 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 TTLL2Q9BWV7 592 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 PIDD1Q9HB75 910 aa12.05□□□□□ -0.48
SKA3-203ENST00000400018 C5orf67F2Z3F1 127 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 OAS1P00973 400 aaKnown RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 ACVRL1P37023 503 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 GPS1Q13098 491 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 DPYSQ14117 519 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 SPARCL1Q14515 664 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 FAM133BQ5BKY9 247 aaKnown RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 BBS7Q8IWZ6 715 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ZNF707Q96C28 371 aaPredicted RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 PRICKLE1Q96MT3 831 aaPredicted RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 AGAP3Q96P47 875 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 DNMT3LQ9UJW3 386 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 FRYLO94915 3013 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 CCDC78A2IDD5 438 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 SASH3O75995 380 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 KRT14P02533 472 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 SCNN1AP37088 669 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ETFBP38117 255 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ADCY8P40145 1251 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 SEMA3BQ13214 749 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ACAP1Q15027 740 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 P3H1Q32P28 736 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 TTC31Q49AM3 519 aaPredicted RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 FSCBQ5H9T9 825 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 OR2W6PQ8NHA6 318 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 SERPINB11Q96P15 392 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ASAH2Q9NR71 780 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.04□□□□□ -0.48
SKA3-203ENST00000400018 ARHGEF38Q9NXL2 777 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
SKA3-203ENST00000400018 ZFP37Q9Y6Q3 630 aaPredicted RBP12.04□□□□□ -0.48
SKA3-203ENST00000400018 J3KR12 359 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 DCLK1O15075 740 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 USP12O75317 370 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 ECEL1O95672 775 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 H2AFXP16104 143 aaPredicted RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 GBP1P32455 592 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 MAXP61244 160 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 TAZQ16635 292 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 MAP7D3Q8IWC1 876 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 TSEN2Q8NCE0 465 aaKnown RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 SLC35B2Q8TB61 432 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 C2orf15Q8WU43 125 aaKnown RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 APOL2Q9BQE5 337 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 SLC39A8Q9C0K1 460 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 LRRC19Q9H756 370 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 H3BQ06 376 aaPredicted RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 APOC4-APOC2K7ER74 178 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 CES2O00748 559 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 METTL18O95568 372 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 APOC2P02655 101 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 BASP1P80723 227 aaKnown RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 MESP2Q0VG99 397 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 HYAL1Q12794 435 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 ARL13BQ3SXY8 428 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 SLC9A4Q6AI14 798 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 GET4Q7L5D6 327 aaPredicted RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 ARCQ7LC44 396 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 SMG7Q92540 1137 aaKnown RBP12.03□□□□□ -0.48
SKA3-203ENST00000400018 RSPRY1Q96DX4 576 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 PLVAPQ9BX97 442 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 GRHL1Q9NZI5 618 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 IRAK3Q9Y616 596 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 C2orf16Q68DN1 1984 aa12.03□□□□□ -0.48
SKA3-203ENST00000400018 A0A0U1RQS6 177 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms