RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 RABGAP1LQ5R372 815 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 STXBP5Q5T5C0 1151 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 SYDE1Q6ZW31 735 aaPredicted RBP7.06□□□□□ -1.28
USP16-203ENST00000399975 C14orf80Q86SX3 495 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 RFX6Q8HWS3 928 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 CCDC50Q8IVM0 306 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 UMODL1-AS1Q8N2C9 162 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 GPR161Q8N6U8 529 aaKnown RBP7.06□□□□□ -1.28
USP16-203ENST00000399975 RTL3Q8N8U3 475 aaKnown RBP7.06□□□□□ -1.28
USP16-203ENST00000399975 PRELID2Q8N945 189 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 HNRNPLLQ8WVV9 542 aaKnown RBP7.06□□□□□ -1.28
USP16-203ENST00000399975 SMARCD2Q92925 531 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 WBP2Q969T9 261 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 ZSWIM3Q96MP5 696 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 GUCD1Q96NT3 240 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 CDX2Q99626 313 aaPredicted RBP7.06□□□□□ -1.28
USP16-203ENST00000399975 GKN1Q9NS71 199 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 KLHL11Q9NVR0 708 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 COX16Q9P0S2 106 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 COL4A3Q01955 1670 aa7.06□□□□□ -1.28
USP16-203ENST00000399975 CTAGE15A4D2H0 777 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 F5H5T6 163 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 KRIT1O00522 736 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ECI2O75521 394 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CTAGE8P0CG41 777 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 SERPINB6P35237 376 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CHKAP35790 457 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 TNK2Q07912 1038 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 NAA30Q147X3 362 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 PUS10Q3MIT2 529 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 FBXL22Q6P050 247 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CTAGE6Q86UF2 777 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CTAGE4Q8IX94 777 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ZNF557Q8N988 423 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 SH3RF2Q8TEC5 729 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 FGF13Q92913 245 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ELSPBP1Q96BH3 223 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ACSF2Q96CM8 615 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 RTP4Q96DX8 246 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 PSMB7Q99436 277 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CALN1Q9BXU9 219 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CLDND1Q9NY35 253 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 STIM2Q9P246 746 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CFAP97Q9P2B7 532 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 XPO7Q9UIA9 1087 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 SH3BP1Q9Y3L3 701 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CHD9Q3L8U1 2897 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 TCRBV7S2A1N4TA0A589 114 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 BCLAF3A2AJT9 711 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 ANHXE9PGG2 379 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 LIASO43766 372 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CST8O60676 142 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CLDN11O75508 207 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CKMP06732 381 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ITGAVP06756 1048 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 TUBBP07437 444 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 KRT10P13645 584 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 GJA1P17302 382 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ERCC2P18074 760 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 LMNB2Q03252 620 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 DLX2Q07687 328 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 ADCY2Q08462 1091 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 GALNT2Q10471 571 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 DHX34Q14147 1143 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 OASLQ15646 514 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 FAM78AQ5JUQ0 283 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 SETD3Q86TU7 594 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 DENND1CQ8IV53 801 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 HJURPQ8NCD3 748 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 ZSCAN18Q8TBC5 510 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 PRICKLE1Q96MT3 831 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 TSGA13Q96PP4 275 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 FEZ2Q9UHY8 353 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 TBC1D30Q9Y2I9 924 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 NYNRINQ9P2P1 1898 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 CFAP69A5D8W1 941 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 FAM187AA6NFU0 413 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 PRAMEF12O95522 483 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 PENKP01210 267 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 HMBSP08397 361 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 AMPD1P23109 780 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 COILP38432 576 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 VCPP55072 806 aaKnown RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 OXCT1P55809 520 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 YBEYP58557 167 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 PRKD1Q15139 912 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 LEXMQ3ZCV2 418 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 MPPE1Q53F39 396 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 PPP6R3Q5H9R7 873 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 RAP1GAP2Q684P5 730 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 TMCO3Q6UWJ1 677 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CHSY1Q86X52 802 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 ARID3BQ8IVW6 561 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.05□□□□□ -1.28
USP16-203ENST00000399975 IGSF8Q969P0 613 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 LMLNQ96KR4 655 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 CAPZA3Q96KX2 299 aa7.05□□□□□ -1.28
USP16-203ENST00000399975 QKIQ96PU8 341 aaKnown RBP eCLIP7.05□□□□□ -1.283e-8■■■□□ 15.2
USP16-203ENST00000399975 CARD6Q9BX69 1037 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms