RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 BNC2Q6ZN30 1099 aaPredicted RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 BBS5Q8N3I7 341 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 ATP6V1E2Q96A05 226 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 OSBPL6Q9BZF3 934 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 COG4Q9H9E3 785 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 WDR37Q9Y2I8 494 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 COQ6Q9Y2Z9 468 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 FIS1Q9Y3D6 152 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 APOEP02649 317 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 HOXD12P35452 270 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 GHRHRQ02643 423 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 CES3Q6UWW8 571 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 ATG14Q6ZNE5 492 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 ZNF786Q8N393 782 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 GFM2Q969S9 779 aaKnown RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 MFSD14AQ96MC6 490 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 OR52B2Q96RD2 323 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 TCHPQ9BT92 498 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 FBXO40Q9UH90 709 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 SH3PXD2BA1X283 911 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 FBP2O00757 339 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 CASQ2O14958 399 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 AP1G1O43747 822 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 FBXO21O94952 628 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SUPT20HL2P0C7V6 817 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 RALBP11234 206 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 PORP16435 677 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 GJA8P48165 433 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ESRRGP62508 458 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SUPT20HL1Q3ZLR7 823 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 FSCBQ5H9T9 825 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 CYP2R1Q6VVX0 501 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 BBS12Q6ZW61 710 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 OR5B17Q8NGF7 314 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 CORO1BQ9BR76 489 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ZNF696Q9H7X3 374 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ZNF408Q9H9D4 720 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 TXNRD2Q9NNW7 524 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 TXNDC16Q9P2K2 825 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 CDC14AQ9UNH5 594 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SPATA31C2B4DYI2 1134 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 BTBD19C9JJ37 291 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 DGAT1O75907 488 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 RBL1P28749 1068 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ADORA2AP29274 412 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SESN2P58004 480 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SLC9A4Q6AI14 798 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SULF1Q8IWU6 871 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ZNF781Q8N8C0 355 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 CIB1Q99828 191 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SLC4A5Q9BY07 1137 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 MAF1Q9H063 256 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 COQ10BQ9H8M1 238 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 RBAKQ9NYW8 714 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 NXF1Q9UBU9 619 aaKnown RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 TRIM17Q9Y577 477 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 CSADQ9Y600 493 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 TPD52L2O43399 206 aaKnown RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 ZBTB11O95625 1053 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 KRT7P08729 469 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 FGF3P11487 239 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 KPNA1P52294 538 aaPredicted RBP17.49■□□□□ 0.39
PTPRA-205ENST00000399903 RELAQ04206 551 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 Q3C1V9 767 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 MBLAC2Q68D91 279 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 GPR141Q7Z602 305 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 KIAA0319LQ8IZA0 1049 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 DSELQ8IZU8 1212 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SORCS3Q9UPU3 1222 aa17.49■□□□□ 0.39
PTPRA-205ENST00000399903 SOWAHBA6NEL2 793 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 TYK2P29597 1187 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 CRHR1P34998 444 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 RAB6CQ53S08 254 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 SH3PXD2AQ5TCZ1 1133 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 TMEM198Q66K66 360 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 KYQ8NBH2 561 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 NETO2Q8NC67 525 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 DEPTORQ8TB45 409 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 RMND5BQ96G75 393 aaPredicted RBP17.48■□□□□ 0.39
PTPRA-205ENST00000399903 VCPIP1Q96JH7 1222 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 GCOM2Q9BZD3 368 aaPredicted RBP17.48■□□□□ 0.39
PTPRA-205ENST00000399903 RAB6CQ9H0N0 254 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 ADAMTS5Q9UNA0 930 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 NFASCO94856 1347 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 TMEM247A6NEH6 219 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 SPTLC1O15269 473 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 ARIH2O95376 493 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 VNN1O95497 513 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 ARRB2P32121 409 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 CD300CQ08708 224 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 PGLYRP2Q96PD5 576 aa17.48■□□□□ 0.39
PTPRA-205ENST00000399903 MYO18AQ92614 2054 aaKnown RBP17.48■□□□□ 0.39
PTPRA-205ENST00000399903 K7ERI5 159 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 RNASEH2AO75792 299 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 IL1BP01584 269 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 SERPINE1P05121 402 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms