RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TMPRSS11AQ6ZMR5 421 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SPATA2LQ8IUW3 424 aaPredicted RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF354BQ96LW1 612 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF577Q9BSK1 485 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 MLXIPLQ9NP71 852 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 TDRKHQ9Y2W6 561 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 A0A1W2PQ27 194 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 A0A1W2PQ64 194 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 A0A1W2PQD8 194 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 OR5F1O95221 314 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 CDK10Q15131 360 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ASPRV1Q53RT3 343 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC16A9Q7RTY1 509 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ARMC10Q8N2F6 343 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF594Q96JF6 807 aaPredicted RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 A0A075B6Q4 140 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 EML1O00423 815 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 PPP2R2BQ00005 443 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ACAP1Q15027 740 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ATP13A4Q4VNC1 1196 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 RNASEH2BQ5TBB1 312 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ACAD10Q6JQN1 1059 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GTF2H5Q6ZYL4 71 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 TMEM110Q86TL2 294 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 AIFM3Q96NN9 605 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SSX3Q99909 188 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 NAT9Q9BTE0 207 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 HGH1Q9BTY7 390 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GPR63Q9BZJ6 419 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 PRKAA2P54646 552 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 FASTKD3Q14CZ7 662 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 FANCBQ8NB91 859 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZHX1-C8orf76Q96EF9 292 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 HIPK3Q9H422 1215 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 RC3H2Q9HBD1 1191 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 H3BNH8 94 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 MSH4O15457 936 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 WFS1O76024 890 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC1A2P43004 574 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SETD6Q8TBK2 473 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ADIPOR1Q96A54 375 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 MTIF3Q9H2K0 278 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 HCN3Q9P1Z3 774 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ITIH6Q6UXX5 1313 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC7A2P52569 658 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PRKAA1Q13131 559 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PTK7Q13308 1070 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 IL18Q14116 193 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PGS1Q32NB8 556 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PLEKHF1Q96S99 279 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PSME2Q9UL46 239 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CBY1Q9Y3M2 126 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 FTCDO95954 541 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CFL1P23528 166 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 KBTBD2Q8IY47 623 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TOR1AIP2Q8NFQ8 470 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 UCMAQ8WVF2 138 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 IFT80Q9P2H3 777 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 B4E1Z4 1266 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 COASYQ13057 564 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 RFX4Q33E94 735 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ADNP2Q6IQ32 1131 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TPGS1Q6ZTW0 290 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CLVS1Q8IUQ0 354 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF808Q8N4W9 903 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF564Q8TBZ8 553 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TMEM216Q9P0N5 145 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 COMMD3-BMI1R4GMX3 469 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ANKRD50Q9ULJ7 1429 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZMYM6O95789 1325 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CCNE2O96020 404 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 NCK1P16333 377 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ARCN1P48444 511 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 OR2L8Q8NGY9 312 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SUN3Q8TAQ9 357 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CCDC74AQ96AQ1 378 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PPP1R10Q96QC0 940 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TBC1D13Q9NVG8 400 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 HIF3AQ9Y2N7 669 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ADSSP30520 456 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SAMD4BQ5PRF9 694 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CCSER1Q9C0I3 900 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 AGAP1Q9UPQ3 857 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 UNC13CQ8NB66 2214 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 RAPGEF2Q9Y4G8 1499 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SH3TC1Q8TE82 1336 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 POLR1CO15160 346 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 DNTTP04053 509 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CSH1P0DML2 217 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CSH2P0DML3 217 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SGO1Q5FBB7 561 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CCNJLQ8IV13 435 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 DNAJB14Q8TBM8 379 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 MALSU1Q96EH3 234 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SMURF1Q9HCE7 757 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms