RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ARL13BQ3SXY8 428 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FSCBQ5H9T9 825 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 EFHC2Q5JST6 749 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ERMARDQ5T6L9 678 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CWF19L1Q69YN2 538 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FSTL4Q6MZW2 842 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TRIM67Q6ZTA4 783 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DDI1Q8WTU0 396 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TEKT4Q8WW24 435 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CD101Q93033 1021 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RPRD1AQ96P16 312 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DDX50Q9BQ39 737 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MPP6Q9NZW5 540 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 STIM2Q9P246 746 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 OR12D3Q9UGF7 316 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FBXL21Q9UKT6 434 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MTF2Q9Y483 593 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ALG6Q9Y672 507 aa12.81□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CHD5Q8TDI0 1954 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MUC22E2RYF6 1773 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CD48P09326 243 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DESP17661 470 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TARSP26639 723 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 EIF2DP41214 584 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MARCKSL1P49006 195 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GALK1P51570 392 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KDSRQ06136 332 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NR1H3Q13133 447 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FZD5Q13467 585 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PON2Q15165 354 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DPYSL2Q16555 572 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KIAA0907Q7Z7F0 614 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NLRP14Q86W24 1093 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PSTKQ8IV42 348 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 REXO1L1PQ8IX06 675 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FAM71BQ8TC56 605 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FAM3CQ92520 227 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TSC1Q92574 1164 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MSANTD3Q96H12 275 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NCAPGQ9BPX3 1015 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FOXQ1Q9C009 403 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DHX35Q9H5Z1 703 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TBC1D17Q9HA65 648 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PCDH18Q9HCL0 1135 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 C11orf16Q9NQ32 467 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DNAJC17Q9NVM6 304 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KLHL11Q9NVR0 708 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PPARGC1AQ9UBK2 798 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 HCN2Q9UL51 889 aa12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.8□□□□□ -0.36
HLA-DQB1-203ENST00000399082 A0A1B0GVM2 712 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TCAF2A6NFQ2 919 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 M0R296 226 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NRDCO43847 1150 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SRGAP2O75044 1071 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PALMO75781 387 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LUC7L3O95232 432 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CYBBP04839 570 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ALADP13716 330 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 IL4RP24394 825 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 HLA-FP30511 346 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CD70P32970 193 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GJC1P36383 396 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLC1A1P43005 524 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SSR1P43307 286 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GEN1Q17RS7 908 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RABGAP1LQ5R372 815 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ACBD5Q5T8D3 534 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TMEM215Q68D42 235 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ANKS1BQ7Z6G8 1248 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CCAR2Q8N163 923 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 HSPH1Q92598 858 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KRT35Q92764 455 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TBC1D31Q96DN5 1066 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 P2RY13Q9BPV8 354 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LTB4R2Q9NPC1 389 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GUCA1BQ9UMX6 200 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLC27A6Q9Y2P4 619 aa12.79□□□□□ -0.36
HLA-DQB1-203ENST00000399082 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KANSL1LA0AUZ9 987 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 C3orf70A6NLC5 250 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 USP27XA6NNY8 438 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 K7EQS6 105 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CREB3O43889 395 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms