RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 UBIAD1Q9Y5Z9 338 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PSAT1Q9Y617 370 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SNNO75324 88 aaPredicted RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 TRMUO75648 421 aaKnown RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 SEC24DO94855 1032 aaPredicted RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 EPHA3P29320 983 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 THOP1P52888 689 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 BAATQ14032 418 aaPredicted RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 PDE1CQ14123 709 aaPredicted RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 RARS2Q5T160 578 aaKnown RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 TMEM198Q66K66 360 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ITPRIPL1Q6GPH6 555 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 SAMD3Q8N6K7 520 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ZNF781Q8N8C0 355 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 OR52B2Q96RD2 323 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 COG4Q9H9E3 785 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 PLAC1Q9HBJ0 212 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 CYP26B1Q9NR63 512 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ANKEF1Q9NU02 776 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 LAMB2P55268 1798 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 A0A1W2PRU2 124 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 PRPSAP2O60256 369 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 RALBP11234 206 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 FGF3P11487 239 aaPredicted RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 IMPDH2P12268 514 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 MAPK10P53779 464 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 SNAPC2Q13487 334 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 TUBB3Q13509 450 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 DCTN2Q13561 401 aaKnown RBP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 C9orf131Q5VYM1 1079 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 SNX31Q8N9S9 440 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ACTRT2Q8TDY3 377 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ATP2A3Q93084 1043 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 EME1Q96AY2 570 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 PPME1Q9Y570 386 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 CDK5RAP2Q96SN8 1893 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 M0QYV0 167 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 FAM58BPP0C7Q3 252 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ERVK-10P10266 1014 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 CRHR1P34998 444 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 MLH1P40692 756 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 SERPINB8P50452 374 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 JAK3P52333 1124 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 OLIG2Q13516 323 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 GRM2Q14416 872 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 MBLAC2Q68D91 279 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 KLHL35Q6PF15 583 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 CPNE9Q8IYJ1 553 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 RIN3Q8TB24 985 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 MAPK15Q8TD08 544 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 GAB3Q8WWW8 586 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 CLEC4DQ8WXI8 215 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 PPP1R16BQ96T49 567 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 KCNK16Q96T55 309 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 PKP2Q99959 881 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 C1orf21Q9H246 121 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ZDHHC7Q9NXF8 308 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 ADA2Q9NZK5 511 aa10.14□□□□□ -0.79
PTCHD4-202ENST00000398738 NFASCO94856 1347 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 GOLGA8TH3BQL2 631 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 DGAT1O75907 488 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 SETSIPP0DME0 302 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 P4HA1P13674 534 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 TCF7P36402 384 aaPredicted RBP10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 ETFBP38117 255 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 CAP2P40123 477 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 KRT76Q01546 638 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 KLF10Q13118 480 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 EMC2Q15006 297 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 DLG2Q15700 870 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 TBCCQ15814 346 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 IL31Q6EBC2 164 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 KBTBD6Q86V97 674 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 MCPH1Q8NEM0 835 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 RXFP2Q8WXD0 754 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 JADE3Q92613 823 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 ATP6V0A1Q93050 837 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 RCN3Q96D15 328 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 PDCD2LQ9BRP1 358 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 CCDC28BQ9BUN5 200 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 NRDE2Q9H7Z3 1164 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 CAB39LQ9H9S4 337 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 NDUFA13Q9P0J0 144 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 PAK5Q9P286 719 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 HMGXB4Q9UGU5 601 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 GPSM3Q9Y4H4 160 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 COL5A3P25940 1745 aaPredicted RBP10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 ARHGAP10A1A4S6 786 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 TNFAIP8O95379 198 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 TRUB2O95900 331 aaKnown RBP10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 ICAM1P05362 532 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 MS4A2Q01362 244 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 CA9Q16790 459 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 DACT2Q5SW24 774 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 WDR78Q5VTH9 848 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 FAM91A1Q658Y4 838 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 LPCAT2Q7L5N7 544 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 NPAS4Q8IUM7 802 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms