RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SYT15Q9BQS2 421 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 DCLRE1BQ9H816 532 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ANLNQ9NQW6 1124 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ADARB2Q9NS39 739 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 FARP1Q9Y4F1 1045 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 AHDC1Q5TGY3 1603 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SMIM28A0A1B0GU29 152 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 H0YC42 278 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ABLIM1O14639 778 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TP73O15350 636 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ATP6V1G1O75348 118 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MPSTP25325 297 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ENPEPQ07075 957 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ADIGQ0VDE8 80 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 CSHL1Q14406 222 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MFSD10Q14728 455 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PLEKHG4Q58EX7 1191 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TCHHL1Q5QJ38 904 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 RIPOR1Q6ZS17 1223 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ASRGL1Q7L266 308 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 RBM15BQ8NDT2 890 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 LPPQ93052 612 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TMA16Q96EY4 203 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF333Q96JL9 665 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ABCG4Q9H172 646 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MAN1C1Q9NR34 630 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 DCDC2Q9UHG0 476 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PPP2R3BQ9Y5P8 575 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MARF1Q9Y4F3 1742 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PARP4Q9UKK3 1724 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TRDMT1O14717 391 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 BUD23O43709 281 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 CD4P01730 458 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 GSTA2P09210 222 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PGGT1BP53609 377 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PKNOX1P55347 436 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NME5P56597 212 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 KLC1Q07866 573 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SNAPC2Q13487 334 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ACSBG2Q5FVE4 666 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 RNF220Q5VTB9 566 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SPDYE1Q8NFV5 336 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PYDC1Q8WXC3 89 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 LRGUKQ96M69 825 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PHACTR1Q9C0D0 580 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 FAM96AQ9H5X1 160 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 POPDC2Q9HBU9 364 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TMEM216Q9P0N5 145 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 FZD9O00144 591 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PEX1O43933 1283 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 LGR5O75473 907 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SMIM10L2AP0DMW4 78 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SMIM10L2BP0DMW5 78 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ACADSP16219 412 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NUDT2P50583 147 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 COPAP53621 1224 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 CDCA2Q69YH5 1023 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 HFE2Q6ZVN8 426 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 UTS2BQ765I0 119 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 UNC93AQ86WB7 457 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 DEFB107AQ8IZN7 70 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ST13P4Q8IZP2 240 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PCDH20Q8N6Y1 951 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 BTN2A2Q8WVV5 523 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MOCOSQ96EN8 888 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 FRMD8Q9BZ67 464 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NUF2Q9BZD4 464 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 CDHR5Q9HBB8 845 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 CASTOR2A6NHX0 329 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 COX4I1P13073 169 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 CDH5P33151 784 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SCNN1GP51170 649 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 STX1BP61266 288 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NSUN2Q08J23 767 aaKnown RBP eCLIP5.05□□□□□ -1.61e-5■■■■□ 24.6
SMAD4-202ENST00000398417 GRTP1Q5TC63 336 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SYPL2Q5VXT5 272 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TRIM67Q6ZTA4 783 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 GPC2Q8N158 579 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NIPA2Q8N8Q9 360 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SPEF2Q9C093 1822 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 IGKV6-21A0A0C4DH24 114 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 DPPA5A6NC42 116 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SRP72O76094 671 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PROCP04070 461 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 YBX3P16989 372 aaKnown RBP eCLIP5.05□□□□□ -1.63e-7■■□□□ 12.8
SMAD4-202ENST00000398417 SMPD1P17405 629 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PTPN1P18031 435 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SLC26A2P50443 739 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 BCAT1P54687 386 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 GEMP55040 296 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MOGSQ13724 837 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SDHAF4Q5VUM1 108 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF280DQ6N043 979 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TDRD5Q8NAT2 981 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PPHLN1Q8NEY8 458 aaKnown RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 RNF139Q8WU17 664 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 C7orf26Q96N11 449 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ADA2Q9NZK5 511 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SPAG17Q6Q759 2223 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms