RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ANKFN1Q8N957 763 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CFAP61Q8NHU2 1237 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 GPRASP2Q96D09 838 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 MIS12Q9H081 205 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC38A10Q9HBR0 1119 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 PPANQ9NQ55 473 aaKnown RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM114A2Q9NRY5 505 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 EMILIN3Q9NT22 766 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 AKAP7Q9P0M2 348 aaPredicted RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 TNFRSF10DQ9UBN6 386 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 KCNN3Q9UGI6 736 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 EGFL7Q9UHF1 273 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 FBXL21Q9UKT6 434 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 NUMBLQ9Y6R0 609 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 A0A0J9YVX5 310 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 F8W8V4 182 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PER2O15055 1255 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 HNRNPRO43390 633 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CALUO43852 315 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 BMP10O95393 424 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 QDPRP09417 244 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SYN1P17600 705 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 VCLP18206 1134 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DSC2Q02487 901 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 KCNMA1Q12791 1236 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC14A1Q13336 389 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 EXOC3L4Q17RC7 722 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CTC1Q2NKJ3 1217 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TRIM72Q6ZMU5 477 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CCNJLQ8IV13 435 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SLFN12Q8IYM2 578 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ACTRT1Q8TDG2 376 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 REXO5Q96IC2 774 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 UBXN10Q96LJ8 280 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 OLFM3Q96PB7 478 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TXLNGYQ9BZA5 131 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ZCCHC2Q9C0B9 1178 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 MYLK2Q9H1R3 596 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 RIOX1Q9H6W3 641 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SPACA1Q9HBV2 294 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TMBIM4Q9HC24 238 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 WWOXQ9NZC7 414 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DMRT1Q9Y5R6 373 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 A0A087X0T9 212 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PMS2P1A4D2B8 440 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ADAM11O75078 769 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 AFPP02771 609 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM153BP0C7A2 387 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM228BP0C875 321 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CCNA2P20248 432 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 NR2F2P24468 414 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TRHRP34981 398 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC1A1P43005 524 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PPP2R2BQ00005 443 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 FAM153CQ494X1 144 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PPP1R26Q5T8A7 1209 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 IQSEC1Q6DN90 963 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 STYK1Q6J9G0 422 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CROCCP2Q86T23 111 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CACNA2D3Q8IZS8 1091 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DDHD1Q8NEL9 900 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 UCMAQ8WVF2 138 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 KRT35Q92764 455 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 P3H4Q92791 437 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ADAD1Q96M93 576 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF560Q96MR9 790 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CDK5RAP1Q96SZ6 601 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 MOV10L1Q9BXT6 1211 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PRKD2Q9BZL6 878 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 RAB17Q9H0T7 212 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PDE7BQ9NP56 450 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 INTS7Q9NVH2 962 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 WBP1LQ9NX94 342 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 GMNCA6NCL1 334 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 USP17L5A8MUK1 530 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 HGSO14964 777 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SLC37A4O43826 429 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PLATP00750 562 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PLA2G4BP0C869 781 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CLUP10909 449 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 KCNJ5P48544 419 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 EIF3BP55884 814 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TSPAN5P62079 268 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TAP1Q03518 808 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 KCNH2Q12809 1159 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 SMAD1Q15797 465 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF674Q2M3X9 581 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 AGBL2Q5U5Z8 902 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DUS1LQ6P1R4 473 aaKnown RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 ANO5Q75V66 913 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 FRMD5Q7Z6J6 570 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CPLX4Q7Z7G2 160 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 CDH24Q86UP0 819 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DNAAF5Q86Y56 855 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 COA7Q96BR5 231 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 PINK1Q9BXM7 581 aa6.76□□□□□ -1.33
TM9SF4-202ENST00000398022 TRIM15Q9C019 465 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms