RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 RCOR2Q8IZ40 523 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 GATA6Q92908 595 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 ATXN7L3BQ96GX2 97 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 NSMCE2Q96MF7 247 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CLK4Q9HAZ1 481 aaKnown RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 PNO1Q9NRX1 252 aaKnown RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 BTBD19C9JJ37 291 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 METTL18O95568 372 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CD2P06729 351 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 GRIK1P39086 918 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 TCIRG1Q13488 830 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 TRIM72Q6ZMU5 477 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CLCC1Q96S66 551 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 HAPLN3Q96S86 360 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 ARPC5LQ9BPX5 153 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 RIBC2Q9H4K1 309 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 SLC24A2Q9UI40 661 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 KMOO15229 486 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 BMP10O95393 424 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 GSTM1P09488 218 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 YAP1P46937 504 aaKnown RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 TPTEP56180 551 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 VMACQ2NL98 169 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 HKDC1Q2TB90 917 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 LCN1P1Q5VSP4 162 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 FAM160B1Q5W0V3 765 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CYP4V2Q6ZWL3 525 aaPredicted RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CXXC5Q7LFL8 322 aaKnown RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CHSY1Q86X52 802 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 ZDHHC13Q8IUH4 622 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 CDK20Q8IZL9 346 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 ZNF655Q8N720 491 aaPredicted RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 MCFD2Q8NI22 146 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 UQCC2Q9BRT2 126 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 UNKQ9C0B0 810 aaKnown RBP9.28□□□□□ -0.92
TRPM1-202ENST00000397795 ALG5Q9Y673 324 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
TRPM1-202ENST00000397795 ZBTB11O95625 1053 aaPredicted RBP9.27□□□□□ -0.92
TRPM1-202ENST00000397795 YES1P07947 543 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 FDFT1P37268 417 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 GSTM5P46439 218 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 PTSQ03393 145 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 SCN1BQ07699 218 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 SLC39A6Q13433 755 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.92
TRPM1-202ENST00000397795 ZNF394Q53GI3 561 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 GPR107Q5VW38 600 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 DGKHQ86XP1 1220 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 HIPK1Q86Z02 1210 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 ATPAF2Q8N5M1 289 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 C10orf53Q8N6V4 93 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 RASGRP4Q8TDF6 673 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 GPKOWQ92917 476 aaPredicted RBP eCLIP9.27□□□□□ -0.92
TRPM1-202ENST00000397795 Q96MT0 163 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 OXCT2Q9BYC2 517 aaPredicted RBP9.27□□□□□ -0.92
TRPM1-202ENST00000397795 BHLHE41Q9C0J9 482 aaPredicted RBP9.27□□□□□ -0.92
TRPM1-202ENST00000397795 S100A14Q9HCY8 104 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 VPS45Q9NRW7 570 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 CD274Q9NZQ7 290 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.27□□□□□ -0.92
TRPM1-202ENST00000397795 SIK3Q9Y2K2 1263 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 PCDHGA11Q9Y5H2 935 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 CROCC2H7BZ55 1655 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 UNC13BO14795 1591 aa9.27□□□□□ -0.92
TRPM1-202ENST00000397795 ULK1O75385 1050 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 FTLP02792 175 aaPredicted RBP9.27□□□□□ -0.93
TRPM1-202ENST00000397795 AFF1P51825 1210 aaKnown RBP9.27□□□□□ -0.93
TRPM1-202ENST00000397795 CHRNDQ07001 517 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 LRRC69Q6ZNQ3 347 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 NT5DC3Q86UY8 548 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 CCDC71Q8IV32 467 aaPredicted RBP9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ZNF614Q8N883 585 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 TAMM41Q96BW9 452 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 SNX27Q96L92 541 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ZNF717Q9BY31 904 aaPredicted RBP9.27□□□□□ -0.93
TRPM1-202ENST00000397795 SHCBP1LQ9BZQ2 653 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 DCLK3Q9C098 648 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ZNF304Q9HCX3 659 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 SLCO1B3Q9NPD5 702 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 KMT5AQ9NQR1 393 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ARL8BQ9NVJ2 186 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 SNX8Q9Y5X2 465 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 KCNQ3O43525 872 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ORC5O43913 435 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 B3GALNT1O75752 331 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 IFI30P13284 250 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ZNF14P17017 642 aaPredicted RBP9.27□□□□□ -0.93
TRPM1-202ENST00000397795 GARTP22102 1010 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 ME2P23368 584 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 MYL9P24844 172 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 AQP5P55064 265 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 SNRNP48Q6IEG0 339 aaKnown RBP9.27□□□□□ -0.93
TRPM1-202ENST00000397795 RFWD3Q6PCD5 774 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 LRRC71Q8N4P6 559 aa9.27□□□□□ -0.93
TRPM1-202ENST00000397795 APOL2Q9BQE5 337 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms