RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 TRIM49P0CI25 452 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 TRIM49CP0CI26 452 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 HSPA1AP0DMV8 641 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 HSPA1BP0DMV9 641 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 CCNA2P20248 432 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MAP4P27816 1152 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 IKQ13123 557 aaPredicted RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 ITGADQ13349 1161 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 OXA1LQ15070 435 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 KCNJ8Q15842 424 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 C6orf183Q5T699 404 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 KSR1Q8IVT5 923 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 C12orf56Q8IXR9 622 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MCOLN2Q8IZK6 566 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 PDZD8Q8NEN9 1154 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 GPRC5AQ8NFJ5 357 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 OR7G1Q8NGA0 311 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 RP9Q8TA86 221 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 ACMSDQ8TDX5 336 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ATG4CQ96DT6 458 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MED30Q96HR3 178 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MAGED4Q96JG8 741 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 SERAC1Q96JX3 654 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 NT5C1BQ96P26 610 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ZNF347Q96SE7 839 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 DCUN1D5Q9BTE7 237 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 RUSC1Q9BVN2 902 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 APOL6Q9BWW8 343 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 PSTPIP2Q9H939 334 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ANLNQ9NQW6 1124 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MAN1C1Q9NR34 630 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 FBXO28Q9NVF7 368 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ANKMY1Q9P2S6 941 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 RBPJLQ9UBG7 517 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 DNPEPQ9ULA0 475 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 PRSS51A0A1B0GVH4 220 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 NOTOA8MTQ0 251 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 TRIM49D1C9J1S8 452 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 RGS13O14921 159 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 H2AFYO75367 372 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 TOM1L1O75674 476 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 BCAS2O75934 225 aaPredicted RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 CHEK2O96017 543 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 KRT1P04264 644 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 SERPINE1P05121 402 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 TFPTP0C1Z6 253 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MAPTP10636 758 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 C7P10643 843 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 NUBP1P53384 320 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 CCNA1P78396 465 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 SP3Q02447 781 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 GRSF1Q12849 480 aaKnown RBP eCLIP10.13□□□□□ -0.79
APTX-207ENST00000397172 CBLBQ13191 982 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 TUBA3CQ13748 450 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 BBS9Q3SYG4 887 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ZNF618Q5T7W0 954 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 NANOGP8Q6NSW7 305 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 C16orf46Q6P387 395 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 DENND5BQ6ZUT9 1274 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 SH2D5Q6ZV89 423 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ARHGEF19Q8IW93 802 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MBOAT7Q96N66 472 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 YME1L1Q96TA2 773 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 TMEM117Q9H0C3 514 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 R3HDMLQ9H3Y0 253 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 RPF2Q9H7B2 306 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 LIN28AQ9H9Z2 209 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 TUFT1Q9NNX1 390 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 MARCOQ9UEW3 520 aaPredicted RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 IPO11Q9UI26 975 aaKnown RBP10.13□□□□□ -0.79
APTX-207ENST00000397172 CPA4Q9UI42 421 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 PRR12Q9ULL5 1215 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 ANGPTL3Q9Y5C1 460 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 NOX1Q9Y5S8 564 aa10.13□□□□□ -0.79
APTX-207ENST00000397172 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 RGSL1A5PLK6 1076 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 SYCE1LA8MT33 242 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 TTC34A8MYJ7 566 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 CLDN25C9JDP6 229 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 H3BMQ9 156 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 ZC3H11AO75152 810 aaKnown RBP eCLIP10.12□□□□□ -0.79
APTX-207ENST00000397172 CNMDO75829 334 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 IFNB1P01574 187 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 KRT3P12035 628 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 KCNA2P16389 499 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 ATF7P17544 494 aaPredicted RBP10.12□□□□□ -0.79
APTX-207ENST00000397172 EEF1DP29692 281 aaKnown RBP10.12□□□□□ -0.79
APTX-207ENST00000397172 GABRB2P47870 512 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 SLC1A6P48664 564 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 MRPS22P82650 360 aaKnown RBP10.12□□□□□ -0.79
APTX-207ENST00000397172 TAP1Q03518 808 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 ART3Q13508 389 aa10.12□□□□□ -0.79
APTX-207ENST00000397172 RFTN1Q14699 578 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms