RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TMEM215Q68D42 235 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 NOP9Q86U38 636 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 SYT12Q8IV01 421 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 LGI2Q8N0V4 545 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 OR2T3Q8NH03 318 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 PRCCQ92733 491 aaPredicted RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 NT5C3BQ969T7 300 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 TTC17Q96AE7 1141 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 EDEM2Q9BV94 578 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 NUCKS1Q9H1E3 243 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 TMEM245Q9H330 911 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 WDCPQ9H6R7 721 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 STIM2Q9P246 746 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 EVLQ9UI08 416 aaPredicted RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 NOCTQ9UK39 431 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 CLEC4EQ9ULY5 219 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 SCML1Q9UN30 329 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 TNRC6BQ9UPQ9 1833 aaKnown RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 GOLGA6L7A0A1B0GV03 622 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 A0A1B0GVM2 712 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 TCAF2A6NFQ2 919 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 M0QYT0 321 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 NDUFS2O75306 463 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 GFPT2O94808 682 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 IGLV3-19P01714 112 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 NNMTP40261 264 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 ZNF165P49910 485 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 RPS24P62847 133 aaKnown RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 LMAN2Q12907 356 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 SYCP2LQ5T4T6 812 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 FAM102AQ5T9C2 384 aaPredicted RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 TAF3Q5VWG9 929 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 RAP1GAP2Q684P5 730 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 KIAA1211LQ6NV74 962 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 ARMCX6Q7L4S7 300 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 XYLT1Q86Y38 959 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 TMPRSS6Q8IU80 811 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 CARNMT1Q8N4J0 409 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 AOPEPQ8N6M6 819 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 ERLEC1Q96DZ1 483 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 SIPA1Q96FS4 1042 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 C1orf74Q96LT6 269 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 PRICKLE1Q96MT3 831 aaPredicted RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 NPY6RQ99463 290 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 PRMT1Q99873 361 aaKnown RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 PCED1AQ9H1Q7 454 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 NLRC4Q9NPP4 1024 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 ITM2CQ9NQX7 267 aa14.41□□□□□ -0.1
SEC13-204ENST00000397099 USP36Q9P275 1121 aaKnown RBP14.41□□□□□ -0.1
SEC13-204ENST00000397099 MUC22E2RYF6 1773 aaPredicted RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 IGHV1OR15-9A0A0B4J2B8 117 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 TARSL2A2RTX5 802 aaKnown RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 WASH3PC4AMC7 463 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 RNASEH1O60930 286 aaKnown RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 CLDN11O75508 207 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 GRAP2O75791 330 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 CYP1A1P04798 512 aaPredicted RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 MMEP08473 750 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 MMP8P22894 467 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 CD6P30203 668 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 CD70P32970 193 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 NSFP46459 744 aaKnown RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 CXCR3P49682 368 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 VASPP50552 380 aaPredicted RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 SGSHP51688 502 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 DEUP1Q05D60 604 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 NME3Q13232 169 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 RNF219Q5W0B1 726 aaPredicted RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 KIAA1324Q6UXG2 1013 aaKnown RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 LRRC31Q6UY01 552 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 TMEFF1Q8IYR6 380 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 CADM4Q8NFZ8 388 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 PIGKQ92643 395 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 LMLNQ96KR4 655 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 NUP58Q9BVL2 599 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 NUSAP1Q9BXS6 441 aaKnown RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 RETREG1Q9H6L5 497 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 ARHGEF38Q9NXL2 777 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 SUSD2Q9UGT4 822 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 MBD1Q9UIS9 605 aaPredicted RBP14.4□□□□□ -0.1
SEC13-204ENST00000397099 RAD54BQ9Y620 910 aa14.4□□□□□ -0.1
SEC13-204ENST00000397099 PI4KAP42356 2102 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 CALB1P05937 261 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 ADRB1P08588 477 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 FERP16591 822 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 PRKCHP24723 683 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 SULT1E1P49888 294 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 PLK1P53350 603 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 GSCP56915 257 aaPredicted RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 RNASE9P60153 205 aaKnown RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 ECT2LQ008S8 904 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 DUOXA1Q1HG43 343 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 TTC31Q49AM3 519 aaPredicted RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 C5orf22Q49AR2 442 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 PITRM1Q5JRX3 1037 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 WDR45BQ5MNZ6 344 aa14.39□□□□□ -0.11
SEC13-204ENST00000397099 PEAR1Q5VY43 1037 aaPredicted RBP14.39□□□□□ -0.11
SEC13-204ENST00000397099 NAA35Q5VZE5 725 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms