RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HGSO14964 777 aaPredicted RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 BIRC5O15392 142 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 HNRNPCL1O60812 293 aaKnown RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 DNAJC6O75061 913 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 MX2P20592 715 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 OVGP1Q12889 678 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 KIF2BQ8N4N8 673 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 PGBD4Q96DM1 585 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 C7orf26Q96N11 449 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 RAB3IPQ96QF0 476 aaPredicted RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 EPAS1Q99814 870 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 TRIM62Q9BVG3 475 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 KCNK13Q9HB14 408 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 CD248Q9HCU0 757 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 DMAP1Q9NPF5 467 aaPredicted RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 ZFP69BQ9UJL9 534 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 TRHDEQ9UKU6 1024 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 INPPL1O15357 1258 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 CA12O43570 354 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 AP2A1O95782 977 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 DLDP09622 509 aaKnown RBP17.23■□□□□ 0.35
NUP50-202ENST00000396096 SLC8A1P32418 973 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 THPOP40225 353 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 SESN2P58004 480 aaPredicted RBP17.23■□□□□ 0.35
NUP50-202ENST00000396096 CDK18Q07002 472 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 TUSC3Q13454 348 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 MROH9Q5TGP6 573 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 CASC4Q6P4E1 433 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 PACS1Q6VY07 963 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 NDUFAF2Q8N183 169 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 NPWQ8N729 165 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 VAT1Q99536 393 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 CEP41Q9BYV8 373 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 WDCPQ9H6R7 721 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 SYBUQ9NX95 663 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 KLHL8Q9P2G9 620 aaPredicted RBP17.23■□□□□ 0.35
NUP50-202ENST00000396096 GABRQQ9UN88 632 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 CASP8AP2Q9UKL3 1982 aa17.23■□□□□ 0.35
NUP50-202ENST00000396096 F5H423 210 aaPredicted RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 B3GAT3O94766 335 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 IGLV3-25P01717 112 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 NEFHP12036 1026 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 SKIP12755 728 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 CST5P28325 142 aaPredicted RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 CYP2C18P33260 490 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 SERPINB6P35237 376 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 TM4SF4P48230 202 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 ARFIP2P53365 341 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 CRADDP78560 199 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 EIF4EBP2Q13542 120 aaPredicted RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 LPIN1Q14693 890 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 FAM26DQ5JW98 314 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 BSPRYQ5W0U4 402 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 KCTD11Q693B1 232 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 CCSAPQ6IQ19 270 aaPredicted RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 DCLRE1AQ6PJP8 1040 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 KYAT3Q6YP21 454 aaKnown RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 CLNKQ7Z7G1 428 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 UNC5BQ8IZJ1 945 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 ARMC2Q8NEN0 867 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 SLC7A6OSQ96CW6 309 aaPredicted RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 RHOBTB2Q9BYZ6 727 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 SLC13A1Q9BZW2 595 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 TKTL2Q9H0I9 626 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 OSBPL2Q9H1P3 480 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 GBA3Q9H227 469 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 CASS4Q9NQ75 786 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 PCMTD2Q9NV79 361 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 LNPEPQ9UIQ6 1025 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 DCTN4Q9UJW0 460 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 KCNK1O00180 336 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 POLBP06746 335 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 ASGR1P07306 291 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 GARSP41250 739 aaKnown RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 BRCC3P46736 316 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 RASSF2P50749 326 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 ZNF33AQ06730 810 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 CTU1Q7Z7A3 348 aaKnown RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 MTDHQ86UE4 582 aaKnown RBP17.22■□□□□ 0.35
NUP50-202ENST00000396096 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 STKLD1Q8NE28 680 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 RSPH1Q8WYR4 309 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 EDEM1Q92611 657 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 DPF3Q92784 378 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 SKA1Q96BD8 255 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 TMLHEQ9NVH6 421 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 OR12D3Q9UGF7 316 aa17.22■□□□□ 0.35
NUP50-202ENST00000396096 BAIAP2L1Q9UHR4 511 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms