RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TBC1D12O60347 775 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SERPINE1P05121 402 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 H2AFXP16104 143 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 JAK1P23458 1154 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 FAM171A1Q5VUB5 890 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 DNAJB3Q8WWF6 145 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM120AQ9BXJ8 343 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 IDI2Q9BXS1 227 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 DPY30Q9C005 99 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 POLE3Q9NRF9 147 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SETD4Q9NVD3 440 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SH3BP4Q9P0V3 963 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TNPO3Q9Y5L0 923 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CITO14578 2027 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 UBE2Q2LH0YL09 131 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TRIM24O15164 1050 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 AMHP03971 560 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MAGEA10P43363 369 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TSNQ15631 228 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ZDHHC13Q8IUH4 622 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PHF21BQ96EK2 531 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 FAM120BQ96EK7 910 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MAML3Q96JK9 1138 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 NSMCE2Q96MF7 247 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 UROC1Q96N76 676 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF232Q9UNY5 417 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SNCAIPQ9Y6H5 919 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TAF6LQ9Y6J9 622 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MEI4A8MW99 385 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PDHXO00330 501 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 DNALI1O14645 258 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF682O95780 498 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 STAU1O95793 577 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 UBTFL6P0CB48 400 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MYL4P12829 197 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 UQCRBP14927 111 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ADORA2AP29274 412 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 GPR15P49685 360 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SERPINH1P50454 418 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 RPS7P62081 194 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ERVK-9P63128 1117 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 STARD3Q14849 445 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PAGE2BQ5JRK9 111 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MTSS1LQ765P7 747 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TLK2Q86UE8 772 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 GPC2Q8N158 579 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 KAT2BQ92831 832 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PPP1R16AQ96I34 528 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TSPAN18Q96SJ8 248 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 FICDQ9BVA6 458 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MRIQ9BWK5 157 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 DIABLOQ9NR28 239 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SAR1AQ9NR31 198 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TPST1O60507 370 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 BAIAP3O94812 1187 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TUBP50607 506 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CREMQ03060 361 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 USP50Q70EL3 339 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 POP5Q969H6 163 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM79Q9BSE2 394 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TNS2Q63HR2 1409 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CABYRO75952 493 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 GNRH1P01148 92 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MYL12AP19105 171 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ATP5C1P36542 298 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SLC6A3Q01959 620 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 AGKQ53H12 422 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ZBTB49Q6ZSB9 765 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 BSNDQ8WZ55 320 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ZFRQ96KR1 1074 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TRIM8Q9BZR9 551 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MROH7Q68CQ1 1323 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SLC9A3R1O14745 358 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 HK2P52789 917 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CYP20A1Q6UW02 462 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 NEK10Q6ZWH5 1172 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF655Q8N720 491 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 EMC1Q8N766 993 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 EPB41L4BQ9H329 900 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CATSPERZQ9NTU4 200 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 EVA1BQ9NVM1 165 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PSME2Q9UL46 239 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MYH13Q9UKX3 1938 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MICAL3Q7RTP6 2002 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CPSF4O95639 269 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FYNP06241 537 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 C2CD6Q53TS8 623 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 NBPF12Q5TAG4 269 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 C9orf131Q5VYM1 1079 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CASP12Q6UXS9 341 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SMIM5Q71RC9 77 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TMC3Q7Z5M5 1100 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 APBA2Q99767 749 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FTHL17Q9BXU8 183 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TKTL2Q9H0I9 626 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 HMX1Q9NP08 348 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 XPNPEP3Q9NQH7 507 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 IFT172Q9UG01 1749 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SCAF8Q9UPN6 1271 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms