RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PRKCHP24723 683 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 NDUFS1P28331 727 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 PAFAH1B1P43034 410 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 SLC37A1P57057 533 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 RUNDC3AQ59EK9 446 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 SH2D4BQ5SQS7 431 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 NAPEPLDQ6IQ20 393 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 RNF207Q6ZRF8 634 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 PXKQ7Z7A4 578 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 MON1AQ86VX9 555 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 SFTPA1Q8IWL2 248 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 SCN4BQ8IWT1 228 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 LAS2Q8IYD9 372 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 C12orf76Q8N812 135 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 EXD3Q8N9H8 876 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 RFWD2Q8NHY2 731 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 METTL6Q8TCB7 284 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 KCNJ9Q92806 393 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 NR1H4Q96RI1 486 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 MPHOSPH8Q99549 860 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 SDF4Q9BRK5 362 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 BCCIPQ9P287 314 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 TBC1D14Q9P2M4 693 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 ADAMTS5Q9UNA0 930 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 NPIPB15A6NHN6 443 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 LINC00473A8K010 186 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZNF213O14771 459 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZNF500O60304 480 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 GUCY1B2O75343 617 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 SCGB1D1O95968 90 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 URODP06132 367 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 UBL4AP11441 157 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 MYCLP12524 364 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 HOXD13P35453 343 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 STAT6P42226 847 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 RAD52P43351 418 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 WDR5P61964 334 aaKnown RBP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 SHC2P98077 582 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 DGCR2P98153 550 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 NUCB1Q02818 461 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 MTHFD1LQ6UB35 978 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 ATF7IPQ6VMQ6 1270 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 SLC39A5Q6ZMH5 540 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 Q6ZNX1 250 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 RTL10Q7L3V2 364 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 WDR53Q7Z5U6 358 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 PEG10Q86TG7 708 aaKnown RBP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 OR8H2Q8N162 312 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 ABHD11Q8NFV4 315 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZCCHC10Q8TBK6 192 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 AKAP1Q92667 903 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 MMS19Q96T76 1030 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 EYA3Q99504 573 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 HTATIP2Q9BUP3 242 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 NSMCE4AQ9NXX6 385 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 SARDHQ9UL12 918 aa5.49□□□□□ -1.53
HMGB1P10-201ENST00000395823 MAST3O60307 1309 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 C16orf96A6NNT2 1141 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 K7ESM1 405 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 SGPL1O95470 568 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 PEX11BO96011 259 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 LAMP2P13473 410 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ATF7P17544 494 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 SLC8A1P32418 973 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ICAM3P32942 547 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 HNF1BP35680 557 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 GPD2P43304 727 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 CDH15P55291 814 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 NAA25Q14CX7 972 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 KAZNQ674X7 775 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 MTFR2Q6P444 385 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 RNF144BQ7Z419 303 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 CPLX4Q7Z7G2 160 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 GALNT5Q7Z7M9 940 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ADGRG6Q86SQ4 1221 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 TMTC2Q8N394 836 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 SLC44A3Q8N4M1 653 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZNF366Q8N895 744 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ENDOVQ8N8Q3 282 aaKnown RBP5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 CHST13Q8NET6 341 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 MAFAQ8NHW3 353 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 PROKR1Q8TCW9 393 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 C2CD4CQ8TF44 421 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ATP2A3Q93084 1043 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 SH3KBP1Q96B97 665 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 PERPQ96FX8 193 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 C20orf173Q96LM9 149 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 GPR78Q96P69 363 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 MACROD1Q9BQ69 325 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 RNF26Q9BY78 433 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 SLC2A4RGQ9NR83 387 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ANKEF1Q9NU02 776 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 ASIC5Q9NY37 505 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 TAS2R10Q9NYW0 307 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 PSAT1Q9Y617 370 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
HMGB1P10-201ENST00000395823 GOLGA6L10A0A0M3HER8 536 aa5.47□□□□□ -1.53
HMGB1P10-201ENST00000395823 A0A1W2PQM1 296 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms