RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 HTR3DQ70Z44 454 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 LRRC49Q8IUZ0 686 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 ZDHHC14Q8IZN3 488 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 SLC35B2Q8TB61 432 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 GAS2L1Q99501 681 aaPredicted RBP14.1□□□□□ -0.15
VAPB-202ENST00000395802 DMGDHQ9UI17 866 aaKnown RBP14.1□□□□□ -0.15
VAPB-202ENST00000395802 AGO1Q9UL18 857 aaKnown RBP14.1□□□□□ -0.15
VAPB-202ENST00000395802 E2F8A0AVK6 867 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 DRGXA6NNA5 263 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 NDC80O14777 642 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 RBP3P10745 1247 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 IRF1P10914 325 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 TCF3P15923 654 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 GJA1P17302 382 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 FSHRP23945 695 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 SLC5A9Q2M3M2 681 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 C5orf22Q49AR2 442 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 RARS2Q5T160 578 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 PRPF38BQ5VTL8 546 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 RAP1GAP2Q684P5 730 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 FBXL22Q6P050 247 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 C1orf228Q6PIY5 440 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 CDKL3Q8IVW4 592 aaPredicted RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 RTL3Q8N8U3 475 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 CCDC89Q8N998 374 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 RSAD2Q8WXG1 361 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 SLC22A12Q96S37 553 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 PRMT1Q99873 361 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 ADAM7Q9H2U9 754 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 GDE1Q9NZC3 331 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 TBC1D14Q9P2M4 693 aa14.09□□□□□ -0.15
VAPB-202ENST00000395802 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 R3HDM2Q9Y2K5 976 aaKnown RBP14.09□□□□□ -0.15
VAPB-202ENST00000395802 H7C0C1 242 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 LEFTY2O00292 366 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 MTSS1O43312 755 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 MOSPD3O75425 235 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 ATP5OP48047 213 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 MAPKAPK2P49137 400 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 MRPS25P82663 173 aaKnown RBP14.08□□□□□ -0.15
VAPB-202ENST00000395802 ZNF33AQ06730 810 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 SNX1Q13596 522 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 DARS2Q6PI48 645 aaKnown RBP14.08□□□□□ -0.15
VAPB-202ENST00000395802 IFT20Q8IY31 132 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.15
VAPB-202ENST00000395802 ATG4AQ8WYN0 398 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 TCEAL4Q96EI5 215 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 RIPOR3Q96MK2 946 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 MAGEB5Q9BZ81 275 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 TMEM248Q9NWD8 314 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 CFAP97Q9P2B7 532 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 DNPEPQ9ULA0 475 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.15
VAPB-202ENST00000395802 OBSL1O75147 1896 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 DENND4CQ5VZ89 1909 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 SGK1O00141 431 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 SLC9A3R1O14745 358 aaPredicted RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 RAD51CO43502 376 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 CLDN11O75508 207 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 STK10O94804 968 aaKnown RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 GLP2RO95838 553 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 PECAM1P16284 738 aaPredicted RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 NDST2P52849 883 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 CDH4P55283 916 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 GRIN2CQ14957 1233 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 OASLQ15646 514 aaKnown RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 STXBP5Q5T5C0 1151 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 CCDC117Q8IWD4 279 aaPredicted RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 CPXM2Q8N436 756 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 CELF5Q8N6W0 485 aaKnown RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 TFB1MQ8WVM0 346 aaKnown RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 HNRNPLLQ8WVV9 542 aaKnown RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 OTUB2Q96DC9 234 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 TTYH1Q9H313 450 aaPredicted RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 DTLQ9NZJ0 730 aa14.08□□□□□ -0.16
VAPB-202ENST00000395802 SAE1Q9UBE0 346 aaPredicted RBP14.08□□□□□ -0.16
VAPB-202ENST00000395802 ATG2AQ2TAZ0 1938 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 BCLAF3A2AJT9 711 aaKnown RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 HEXIM1O94992 359 aaKnown RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 KLKB1P03952 638 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 CYBBP04839 570 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 NTHL1P78549 312 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 SLC7A5Q01650 507 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 GBE1Q04446 702 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 FAM133BQ5BKY9 247 aaKnown RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 HEATR6Q6AI08 1181 aaKnown RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 TTC27Q6P3X3 843 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 C4orf22Q6V702 233 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 Q6ZNB5 142 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 CHST9Q7L1S5 443 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 ZC3H18Q86VM9 953 aaKnown RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 JAMLQ86YT9 394 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 ZNF683Q8IZ20 524 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 LGI2Q8N0V4 545 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 ALLCQ8N6M5 410 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 SH3RF2Q8TEC5 729 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms