RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CSTF1Q05048 431 aaKnown RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 C5orf22Q49AR2 442 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 EGFLAMQ63HQ2 1017 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 SCYL2Q6P3W7 929 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 NUDT18Q6ZVK8 323 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 ANKS1BQ7Z6G8 1248 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 KIAA0907Q7Z7F0 614 aaPredicted RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 ARFGAP1Q8N6T3 406 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 IL17RCQ8NAC3 791 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 CCDC112Q8NEF3 446 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 CCDC26Q8TAB7 109 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 FIBINQ8TAL6 211 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 LMLNQ96KR4 655 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 C1orf74Q96LT6 269 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 HAPLN3Q96S86 360 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 ACOX2Q99424 681 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 PRRX2Q99811 253 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 KCNH6Q9H252 994 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 PRMT8Q9NR22 394 aaPredicted RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 STARD13Q9Y3M8 1113 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 SCINQ9Y6U3 715 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 SRGAP2O75044 1071 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 ADAM23O75077 832 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 CNTN5O94779 1100 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 PTMAP06454 111 aaKnown RBP17.08■□□□□ 0.32
CXCL1-201ENST00000395761 SP9P0CG40 484 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 TDGF1P13385 188 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 CCR3P51677 355 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 LMAN2Q12907 356 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 RABGAP1LQ5R372 815 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
CXCL1-201ENST00000395761 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL1-201ENST00000395761 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.32
CXCL1-201ENST00000395761 TXNDC5Q8NBS9 432 aaKnown RBP17.08■□□□□ 0.32
CXCL1-201ENST00000395761 SORCS1Q8WY21 1168 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 BTBD6Q96KE9 485 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 NUP85Q9BW27 656 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 GGA2Q9UJY4 613 aa17.08■□□□□ 0.32
CXCL1-201ENST00000395761 MUC6Q6W4X9 2439 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 WDFY4Q6ZS81 3184 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 DRGXA6NNA5 263 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 E9PAM4 449 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 FAM72CH0Y354 149 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 H0Y626 953 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 K7ESF4 209 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 SGK1O00141 431 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 H2AFZP0C0S5 128 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 PABPC1P11940 636 aaKnown RBP17.07■□□□□ 0.32
CXCL1-201ENST00000395761 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.32
CXCL1-201ENST00000395761 WASP42768 502 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 DMWDQ09019 674 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 CDH18Q13634 790 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 ARL13BQ3SXY8 428 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 ALFQ53S48 1182 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 FAM72AQ5TYM5 149 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 FAM72DQ6L9T8 149 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 H2AFVQ71UI9 128 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 CHST9Q7L1S5 443 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 SYT13Q7L8C5 426 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 ADIPOR2Q86V24 386 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 FAM72BQ86X60 149 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 KCNV2Q8TDN2 545 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 FNIP1Q8TF40 1166 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 NTAN1Q96AB6 310 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 OSBPL2Q9H1P3 480 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 ELOVL2Q9NXB9 296 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 MPP6Q9NZW5 540 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 FBXO4Q9UKT5 387 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 INTS6Q9UL03 887 aaKnown RBP17.07■□□□□ 0.32
CXCL1-201ENST00000395761 MMP17Q9ULZ9 603 aa17.07■□□□□ 0.32
CXCL1-201ENST00000395761 A0A1B0GVM2 712 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 TCAF2A6NFQ2 919 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 PAPSS2O95340 614 aaPredicted RBP17.06■□□□□ 0.32
CXCL1-201ENST00000395761 NUMBP49757 651 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 PTPN5P54829 565 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 DMC1Q14565 340 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 FUT11Q495W5 492 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 TTC39BQ5VTQ0 682 aaPredicted RBP17.06■□□□□ 0.32
CXCL1-201ENST00000395761 DAB2IPQ5VWQ8 1189 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 MBLAC2Q68D91 279 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 CCDC117Q8IWD4 279 aaPredicted RBP17.06■□□□□ 0.32
CXCL1-201ENST00000395761 PYROXD2Q8N2H3 581 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 OR52K2Q8NGK3 314 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 ACDQ96AP0 544 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 HHIPQ96QV1 700 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 CIPCQ9C0C6 399 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 OR12D3Q9UGF7 316 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 PCSK1NQ9UHG2 260 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 FZD10Q9ULW2 581 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 SLC8A2Q9UPR5 921 aa17.06■□□□□ 0.32
CXCL1-201ENST00000395761 IGLV3-10A0A075B6K4 115 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 WASH3PC4AMC7 463 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 TIMM44O43615 452 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 NRDCO43847 1150 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 LCA5LO95447 670 aa17.05■□□□□ 0.32
CXCL1-201ENST00000395761 MIPP30301 263 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms