RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SYPL2Q5VXT5 272 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 NPNTQ6UXI9 565 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 TMEM184AQ6ZMB5 413 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 HFE2Q6ZVN8 426 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 PPM1EQ8WY54 764 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 NDRG1Q92597 394 aaKnown RBP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 TTC25Q96NG3 672 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 ASB3Q9Y575 518 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 MYO16Q9Y6X6 1858 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 SRRM3A6NNA2 597 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 ALOX15BO15296 676 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 EIF3HO15372 352 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 ZBED1O96006 694 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 IFNB1P01574 187 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 YWHAQP27348 245 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 MAGEA6P43360 314 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 PITX1P78337 314 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 DLX2Q07687 328 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 SKIV2LQ15477 1246 aaKnown RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 FAM71DQ8N9W8 422 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 SERPINB12Q96P63 405 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 OLFM3Q96PB7 478 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 CORO1BQ9BR76 489 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 CAPS2Q9BXY5 557 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 PRKD2Q9BZL6 878 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 DHX35Q9H5Z1 703 aaKnown RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 PIDD1Q9HB75 910 aa15.59■□□□□ 0.09
SCAF11-204ENST00000395454 WDR6Q9NNW5 1121 aaKnown RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 CWC15Q9P013 229 aaKnown RBP15.59■□□□□ 0.09
SCAF11-204ENST00000395454 TBX10O75333 385 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 AGTP01019 485 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 HMGA1P17096 107 aaKnown RBP15.58■□□□□ 0.09
SCAF11-204ENST00000395454 MAGEA4P43358 317 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 TAF10Q12962 218 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 SEMA3BQ13214 749 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 KYNUQ16719 465 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 CTC1Q2NKJ3 1217 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 PPP6R3Q5H9R7 873 aaPredicted RBP15.58■□□□□ 0.09
SCAF11-204ENST00000395454 RARS2Q5T160 578 aaKnown RBP15.58■□□□□ 0.09
SCAF11-204ENST00000395454 ANKRD54Q6NXT1 300 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 C4orf22Q6V702 233 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 FAM131BQ86XD5 332 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 FBXO32Q969P5 355 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 PABPC5Q96DU9 382 aaKnown RBP15.58■□□□□ 0.09
SCAF11-204ENST00000395454 PWWP2AQ96N64 755 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 TRIM62Q9BVG3 475 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 ASAH2Q9NR71 780 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 HCFC1R1Q9NWW0 138 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 CLEC1BQ9P126 229 aa15.58■□□□□ 0.09
SCAF11-204ENST00000395454 LTFP02788 710 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 AUHQ13825 339 aaKnown RBP15.58■□□□□ 0.08
SCAF11-204ENST00000395454 NCBP2-AS2Q69YL0 99 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 SYCE2Q6PIF2 218 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 CDKL3Q8IVW4 592 aaPredicted RBP15.58■□□□□ 0.08
SCAF11-204ENST00000395454 SMG7Q92540 1137 aaKnown RBP15.58■□□□□ 0.08
SCAF11-204ENST00000395454 ZNF707Q96C28 371 aaPredicted RBP15.58■□□□□ 0.08
SCAF11-204ENST00000395454 C10orf88Q9H8K7 445 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 PIGVQ9NUD9 493 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 EURLQ9NYK6 297 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 NAALADL1Q9UQQ1 740 aa15.58■□□□□ 0.08
SCAF11-204ENST00000395454 M0QYT0 321 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 RASGRF2O14827 1237 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 ACSL3O95573 720 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 HOXB8P17481 243 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 ACTN2P35609 894 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 IRAK1P51617 712 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 ZNF135P52742 658 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 EIF4EBP2Q13542 120 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 DARS2Q6PI48 645 aaKnown RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 GRASPQ7Z6J2 395 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 HS6ST3Q8IZP7 471 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 TRMT2BQ96GJ1 504 aaKnown RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 MYRFLQ96LU7 910 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 QKIQ96PU8 341 aaKnown RBP eCLIP15.57■□□□□ 0.089e-8■□□□□ 9
SCAF11-204ENST00000395454 TTLL2Q9BWV7 592 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 STMN4Q9H169 189 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 ARHGEF4Q9NR80 690 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 PAK5Q9P286 719 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 DNMT3BQ9UBC3 853 aaKnown RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 UXTQ9UBK9 157 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 LGALS13Q9UHV8 139 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 NOVA2Q9UNW9 492 aaKnown RBP15.57■□□□□ 0.08
SCAF11-204ENST00000395454 SCML2Q9UQR0 700 aa15.57■□□□□ 0.08
SCAF11-204ENST00000395454 CHADO15335 359 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 F9P00740 461 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 IGLV3-25P01717 112 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 RHOP08100 348 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 PTPN2P17706 415 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 ADRA1BP35368 520 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 LTBRP36941 435 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 ARL4AP40617 200 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 HCAR3P49019 387 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 MAGOHP61326 146 aaKnown RBP15.56■□□□□ 0.08
SCAF11-204ENST00000395454 PPP2R2AP63151 447 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 DEUP1Q05D60 604 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 DPYSQ14117 519 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 KCNJ11Q14654 390 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 STAT4Q14765 748 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 HIF1AQ16665 826 aa15.56■□□□□ 0.08
SCAF11-204ENST00000395454 SLC45A4Q5BKX6 768 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms