RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ALLCQ8N6M5 410 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 FAM71DQ8N9W8 422 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 NETO2Q8NC67 525 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 PIK3R5Q8WYR1 880 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ZNF837Q96EG3 531 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 SEPT5Q99719 369 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 VN1R3Q9BXE9 311 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 PNPLA8Q9NP80 782 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ANLNQ9NQW6 1124 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ATP8A1Q9Y2Q0 1164 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 MFHAS1Q9Y4C4 1052 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 PCDHB9Q9Y5E1 797 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 SNX10Q9Y5X0 201 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CDY1Q9Y6F8 540 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 A0A1W2PQH9 124 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 KLHL33A6NCF5 533 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ANKRD33BA6NCL7 494 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 FAM72CH0Y354 149 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 KIAA0355O15063 1070 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 MCF2LO15068 1137 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CREB3O43889 395 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TBC1D4O60343 1298 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 VNN2O95498 520 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ITGAVP06756 1048 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 RBP3P10745 1247 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 KLRC2P26717 231 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 OR1D2P34982 312 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ADRA1BP35368 520 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 HSD17B3P37058 310 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ITGA8P53708 1063 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 EIF3BP55884 814 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 WDR5P61964 334 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 YWHAGP61981 247 aaKnown RBP eCLIP7.17□□□□□ -1.26
RTN4-205ENST00000394609 GPS1Q13098 491 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 IFT88Q13099 833 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CALCOCO2Q13137 446 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 GPR17Q13304 367 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 BTG3Q14201 252 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 ITIH4Q14624 930 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 P3H1Q32P28 736 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 RNF187Q5TA31 235 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 FAM72AQ5TYM5 149 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 GKAP1Q5VSY0 366 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 FAM72DQ6L9T8 149 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 MFSD5Q6N075 450 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 DRICH1Q6PGQ1 229 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 KCNT2Q6UVM3 1135 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 VSTM1Q6UX27 236 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 FAM43BQ6ZT52 329 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 ANKS3Q6ZW76 656 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 BNIPLQ7Z465 357 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TAC4Q86UU9 113 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CCDC25Q86WR0 208 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 FAM72BQ86X60 149 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 UNC45BQ8IWX7 931 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 NUP93Q8N1F7 819 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TMEM199Q8N511 208 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CCDC89Q8N998 374 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 UBLCP1Q8WVY7 318 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 IRGQQ8WZA9 623 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ART4Q93070 314 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 RNF34Q969K3 372 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 SNF8Q96H20 258 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 FUBP3Q96I24 572 aaKnown RBP eCLIP7.17□□□□□ -1.262e-9■■■□□ 14.6
RTN4-205ENST00000394609 IGSF21Q96ID5 467 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 PWWP2AQ96N64 755 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CSPG4P5Q96PW8 444 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ZNF670Q9BS34 389 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 WDCPQ9H6R7 721 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 NMUR1Q9HB89 426 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CD248Q9HCU0 757 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 WDR6Q9NNW5 1121 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 ETNK2Q9NVF9 386 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 DNAJC17Q9NVM6 304 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 CUEDC1Q9NWM3 386 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 OSER1Q9NX31 292 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 SFMBT1Q9UHJ3 866 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 DRG1Q9Y295 367 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 DYRK1BQ9Y463 629 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 MTMR11A4FU01 709 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 E7EVH7 732 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 H7C0C1 242 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 H7C4K7 107 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 MEN1O00255 615 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 MSI1O43347 362 aaKnown RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 RHOQP17081 205 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 ITIH2P19823 946 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 ARL4AP40617 200 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 ATP5OP48047 213 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 GBE1Q04446 702 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 SLC10A2Q12908 348 aaPredicted RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 UAP1Q16222 522 aaPredicted RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 USP41Q3LFD5 358 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 EFHC2Q5JST6 749 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 IZUMO3Q5VZ72 239 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 BTBD8Q5XKL5 378 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 SLC9A4Q6AI14 798 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 DARS2Q6PI48 645 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms