RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 MOCS2O96007 188 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 TYMPP19971 482 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 GBP2P32456 591 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 CD68P34810 354 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 FDFT1P37268 417 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 USP46P62068 366 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 ITIH4Q14624 930 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 PARP6Q2NL67 630 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 MROH9Q5TGP6 573 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 FBXW10Q5XX13 1052 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 ZNF276Q8N554 614 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 SLC43A3Q8NBI5 491 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 OR52K1Q8NGK4 314 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 STAMBPL1Q96FJ0 436 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 APOL2Q9BQE5 337 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 GPR62Q9BZJ7 368 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 SYBUQ9NX95 663 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 PHTF1Q9UMS5 762 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 ATXN2Q99700 1313 aaKnown RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 ARVCFO00192 962 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 LPXNO60711 386 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 TADA2AO75478 443 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 TOP3BO95985 862 aaKnown RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 CBLBQ13191 982 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 EIF4EBP2Q13542 120 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 MTFR1Q15390 333 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 PDK4Q16654 411 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 TRPM8Q7Z2W7 1104 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 CCDC63Q8NA47 563 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 GSDMBQ8TAX9 411 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 ZNF75CPQ92670 426 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 PTPRN2Q92932 1015 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 FAM193BQ96PV7 902 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 FAM111AQ96PZ2 611 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 XAB2Q9HCS7 855 aaKnown RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 ENPP3O14638 875 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 INPPL1O15357 1258 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 SPAG6O75602 509 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 STK10O94804 968 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 IGLV3-25P01717 112 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 SLC18A1P54219 525 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 AIF1P55008 147 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 ACTN3Q08043 901 aaPredicted RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 LRRC8BQ6P9F7 803 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 LRRC8DQ7L1W4 858 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 PXYLP1Q8TE99 480 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 LRRC39Q96DD0 335 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 EPAS1Q99814 870 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 SLC13A1Q9BZW2 595 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 RRN3Q9NYV6 651 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 SLC27A5Q9Y2P5 690 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 TET1Q8NFU7 2136 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 SF3B1O75533 1304 aaKnown RBP eCLIP15.47■□□□□ 0.07
GPC3-202ENST00000394299 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 TRDMT1O14717 391 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 IRAK2O43187 625 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 PAGE1O75459 146 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 JCHAINP01591 159 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 GARSP41250 739 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 SCTRP47872 440 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 HCAR3P49019 387 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 PPIDQ08752 370 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 MAPRE1Q15691 268 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 SEPT7Q16181 437 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
GPC3-202ENST00000394299 FAM171A1Q5VUB5 890 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 C4orf50Q6ZRC1 276 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 URGCPQ8TCY9 931 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 LRRC8CQ8TDW0 803 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 ZCWPW1Q9H0M4 648 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 MOCS1Q9NZB8 636 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 PCDH10Q9P2E7 1040 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 PRKAG3Q9UGI9 489 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 NEU3Q9UQ49 428 aa15.47■□□□□ 0.07
GPC3-202ENST00000394299 FAM159BA6NKW6 160 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 DFFAO00273 331 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 OAZ2O95190 189 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 ZWINTO95229 277 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 TBX18O95935 607 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 NUMBP49757 651 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 ARTNQ5T4W7 220 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 TTC39BQ5VTQ0 682 aaPredicted RBP15.46■□□□□ 0.07
GPC3-202ENST00000394299 OTOP3Q7RTS5 596 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 C14orf80Q86SX3 495 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 PACS2Q86VP3 889 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 ZNF296Q8WUU4 475 aaPredicted RBP15.46■□□□□ 0.07
GPC3-202ENST00000394299 FCRL2Q96LA5 508 aaPredicted RBP15.46■□□□□ 0.07
GPC3-202ENST00000394299 ABCC13Q9NSE7 274 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 MPP6Q9NZW5 540 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.46■□□□□ 0.07
GPC3-202ENST00000394299 PSAT1Q9Y617 370 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 NLRC5Q86WI3 1866 aa15.46■□□□□ 0.07
GPC3-202ENST00000394299 RFPL1O75677 317 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 SUN1O94901 812 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 UBOX5O94941 541 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 FSBPO95073 299 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 TPH1P17752 444 aa15.46■□□□□ 0.06
GPC3-202ENST00000394299 NFKB1P19838 968 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms