RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CST6Q15828 149 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 HNRNPA1L2Q32P51 320 aaKnown RBP15.97■□□□□ 0.15
CHMP3-202ENST00000393773 NADSYN1Q6IA69 706 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 NCEH1Q6PIU2 408 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 MFN1Q8IWA4 741 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 TTC17Q96AE7 1141 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 MYEOVQ96EZ4 313 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 DCBLD2Q96PD2 775 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 HESX1Q9UBX0 185 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 SUN2Q9UH99 717 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 ADAMTS1Q9UHI8 967 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 COQ4Q9Y3A0 265 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 ITIH6Q6UXX5 1313 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 A0A1W2PP55 124 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 A0A1W2PR77 199 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 WNT9AO14904 365 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 IRAK2O43187 625 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 STX10O60499 249 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 RFPL3O75679 317 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 CD19P15391 556 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 EPHA8P29322 1005 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 CSKP41240 450 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 SYKP43405 635 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 NDUFA8P51970 172 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 DNAJC3Q13217 504 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 ARID5BQ14865 1188 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 PRAMEF14Q5SWL7 426 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 NUGGCQ68CJ6 796 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 DHX40Q8IX18 779 aaKnown RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 SMYD4Q8IYR2 804 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 ZNF557Q8N988 423 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 HJURPQ8NCD3 748 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 UBA3Q8TBC4 463 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 PIP4K2CQ8TBX8 421 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 SAP25Q8TEE9 199 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 CCDC47Q96A33 483 aaKnown RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 CNDP2Q96KP4 475 aaKnown RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 UBL7Q96S82 380 aaPredicted RBP15.96■□□□□ 0.15
CHMP3-202ENST00000393773 FBXL12Q9NXK8 326 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 FZD4Q9ULV1 537 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 NCKAP1Q9Y2A7 1128 aa15.96■□□□□ 0.15
CHMP3-202ENST00000393773 ZNF462Q96JM2 2506 aa15.96■□□□□ 0.14
CHMP3-202ENST00000393773 FAM47DPA6NHR8 397 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 TLX3O43711 291 aaPredicted RBP15.95■□□□□ 0.14
CHMP3-202ENST00000393773 ACSL4O60488 711 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 C1QL1O75973 258 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 ASLP04424 464 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 EPB41P11171 864 aaKnown RBP15.95■□□□□ 0.14
CHMP3-202ENST00000393773 VDRP11473 427 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 LCP1P13796 627 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 HNF1BP35680 557 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 SLC11A2P49281 568 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 C9orf64Q5T6V5 341 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 KDM1BQ8NB78 822 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 FIBINQ8TAL6 211 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 CLEC4CQ8WTT0 213 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 IRGQQ8WZA9 623 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 FCRL2Q96LA5 508 aaPredicted RBP15.95■□□□□ 0.14
CHMP3-202ENST00000393773 ZSWIM1Q9BR11 485 aa15.95■□□□□ 0.14
CHMP3-202ENST00000393773 COL27A1Q8IZC6 1860 aaPredicted RBP15.95■□□□□ 0.14
CHMP3-202ENST00000393773 EIF4E1BA6NMX2 242 aaKnown RBP15.94■□□□□ 0.14
CHMP3-202ENST00000393773 RNASEH2AO75792 299 aaKnown RBP15.94■□□□□ 0.14
CHMP3-202ENST00000393773 LTFP02788 710 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 PRB1P04280 392 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 ITPKBP27987 946 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 EIF2S3P41091 472 aaKnown RBP15.94■□□□□ 0.14
CHMP3-202ENST00000393773 CTSOP43234 321 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-202ENST00000393773 RGS7P49802 495 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 ADPRHP54922 357 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 RPS24P62847 133 aaKnown RBP15.94■□□□□ 0.14
CHMP3-202ENST00000393773 DCAF17Q5H9S7 520 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-202ENST00000393773 FSCBQ5H9T9 825 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 PITRM1Q5JRX3 1037 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 SFMBT2Q5VUG0 894 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 PMF1Q6P1K2 205 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 LCLAT1Q6UWP7 414 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 KRBA2Q6ZNG9 492 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 UNC45BQ8IWX7 931 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 AADATQ8N5Z0 425 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 OR2T34Q8NGX1 318 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 GANCQ8TET4 914 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 TFAP2BQ92481 460 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 TSC1Q92574 1164 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 AZIN2Q96A70 460 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 NEUROG2Q9H2A3 272 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 STIM2Q9P246 746 aa15.94■□□□□ 0.14
CHMP3-202ENST00000393773 LRRC72A6NJI9 287 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 TTC34A8MYJ7 566 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 PIK3R2O00459 728 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 SLC16A3O15427 465 aaKnown RBP15.93■□□□□ 0.14
CHMP3-202ENST00000393773 YKT6O15498 198 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 RNASEH1O60930 286 aaKnown RBP15.93■□□□□ 0.14
CHMP3-202ENST00000393773 LDOC1O95751 146 aaPredicted RBP15.93■□□□□ 0.14
CHMP3-202ENST00000393773 ABCB4P21439 1286 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 CD38P28907 300 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 PSMD8P48556 350 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 CCR5P51681 352 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 TBX4P57082 545 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 NXPH1P58417 271 aa15.93■□□□□ 0.14
CHMP3-202ENST00000393773 ST8SIA6P61647 398 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms