RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 POLR1BQ9H9Y6 1135 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
PTPA-207ENST00000393370 ST14Q9Y5Y6 855 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 ETFBP38117 255 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 HSD17B4P51659 736 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 GABPAQ06546 454 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
PTPA-207ENST00000393370 PERM1Q5SV97 790 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 BBS12Q6ZW61 710 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 PGAM4Q8N0Y7 254 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 SIX6OS1Q8N1H7 587 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 TFAP2CQ92754 450 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 PARVBQ9HBI1 364 aa17.51■□□□□ 0.39
PTPA-207ENST00000393370 ITGB4P16144 1822 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
PTPA-207ENST00000393370 SLC16A4O15374 487 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 GLDCP23378 1020 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 GNA15P30679 374 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 NDUFA5Q16718 116 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 SCARA3Q6AZY7 606 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 DCUN1D2Q6PH85 259 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 KCNT2Q6UVM3 1135 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 UNC5AQ6ZN44 842 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 TTC30AQ86WT1 665 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 PSD2Q9BQI7 771 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 NOL11Q9H8H0 719 aaKnown RBP17.5■□□□□ 0.39
PTPA-207ENST00000393370 NUB1Q9Y5A7 615 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 GPR25O00155 361 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 GAS7O60861 476 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 MZF1P28698 734 aaPredicted RBP17.5■□□□□ 0.39
PTPA-207ENST00000393370 GMPRP36959 345 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 HARS2P49590 506 aaKnown RBP17.5■□□□□ 0.39
PTPA-207ENST00000393370 LDLRAP1Q5SW96 308 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 FAXCQ5TGI0 409 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
PTPA-207ENST00000393370 PTBP2Q9UKA9 531 aaKnown RBP17.5■□□□□ 0.39
PTPA-207ENST00000393370 SOCS2O14508 198 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 AKAP10O43572 662 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 FOSP01100 380 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 S100BP04271 92 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 PRKCGP05129 697 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 SLURP2P0DP57 97 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 GRK2P25098 689 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 IDUAP35475 653 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 SELENBP1Q13228 472 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 FAM47CQ5HY64 1035 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 TMEM270Q6UE05 265 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 Q8N9G6 341 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 ZNF641Q96N77 438 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 GPR101Q96P66 508 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 PCDHAC1Q9H158 963 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 WDR55Q9H6Y2 383 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 RAB6BQ9NRW1 208 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 RSL1D1O76021 490 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 MYO1DO94832 1006 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 RALBP11234 206 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 MAP4P27816 1152 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 IL1R2P27930 398 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 GTF2BQ00403 316 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 HMBOX1Q6NT76 420 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 ZBTB49Q6ZSB9 765 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 IQCF2Q8IXL9 164 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 TMCO5AQ8N6Q1 288 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 TMA16Q96EY4 203 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 OTUD5Q96G74 571 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 TCF7L2Q9NQB0 619 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 SLC17A6Q9P2U8 582 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 COL16A1Q07092 1604 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 ALDOAP04075 364 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 MMP8P22894 467 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 NUMBP49757 651 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 CAND1Q86VP6 1230 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 SNX29P2Q8IUI4 249 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 RP9Q8TA86 221 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 SLCO4A1Q96BD0 722 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 C1orf50Q9BV19 199 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 NANOGQ9H9S0 305 aa17.49■□□□□ 0.39
PTPA-207ENST00000393370 IPO11Q9UI26 975 aaKnown RBP17.49■□□□□ 0.39
PTPA-207ENST00000393370 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 NEMP1O14524 444 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 KCNH1O95259 989 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 EIF2S1P05198 315 aaKnown RBP17.48■□□□□ 0.39
PTPA-207ENST00000393370 CCNA2P20248 432 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 OSBPP22059 807 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 CCT8P50990 548 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 UBXN2AP68543 259 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 IFITM2Q01629 132 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 TRPC3Q13507 836 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 BRDTQ58F21 947 aaPredicted RBP17.48■□□□□ 0.39
PTPA-207ENST00000393370 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 SPATA18Q8TC71 538 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 AMNQ9BXJ7 453 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms