RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 CRLF3Q8IUI8 442 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 NAT8LQ8N9F0 302 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 ZNF398Q8TD17 642 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 FAM172AQ8WUF8 416 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 ZNF518BQ9C0D4 1074 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 PCDH9Q9HC56 1237 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 PNPOQ9NVS9 261 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 DDX43Q9NXZ2 648 aaKnown RBP11.6□□□□□ -0.55
SPOP-202ENST00000393328 SHOC2Q9UQ13 582 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 DNAJC16Q9Y2G8 782 aa11.6□□□□□ -0.55
SPOP-202ENST00000393328 MRPL42Q9Y6G3 142 aaKnown RBP11.6□□□□□ -0.55
SPOP-202ENST00000393328 CLDN5O00501 218 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 PGK1P00558 417 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 PFKMP08237 780 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 RBP3P10745 1247 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 VDRP11473 427 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 UQCRBP14927 111 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 EIF3EP60228 445 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 SOX4Q06945 474 aaPredicted RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 CA9Q16790 459 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 HADHQ16836 314 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 DARS2Q6PI48 645 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPOP-202ENST00000393328 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 LCA5Q86VQ0 697 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 APLFQ8IW19 511 aaPredicted RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 METTL25Q8N6Q8 603 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 ARRDC4Q8NCT1 418 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 FAF2Q96CS3 445 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 SMYD2Q9NRG4 433 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 RAB6BQ9NRW1 208 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 UBAP1Q9NZ09 502 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 RPL26L1Q9UNX3 145 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 COMMD3-BMI1R4GMX3 469 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 MYO18AQ92614 2054 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 C3orf70A6NLC5 250 aaPredicted RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 GABBR2O75899 941 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 APRTP07741 180 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 RPL10P27635 214 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 CDH5P33151 784 aaPredicted RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 PAN2Q504Q3 1202 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 C6orf52Q5T4I8 152 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 IQSEC1Q6DN90 963 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 TWF2Q6IBS0 349 aaKnown RBP11.59□□□□□ -0.55
SPOP-202ENST00000393328 SLC27A1Q6PCB7 646 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 KLHDC10Q6PID8 442 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 PHTF2Q8N3S3 785 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 NME8Q8N427 588 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPOP-202ENST00000393328 SPATA18Q8TC71 538 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
SPOP-202ENST00000393328 VILLO15195 856 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 MAGEC1O60732 1142 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 SOWAHAQ2M3V2 549 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 DUS1LQ6P1R4 473 aaKnown RBP11.58□□□□□ -0.55
SPOP-202ENST00000393328 CXCL17Q6UXB2 119 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 ATG14Q6ZNE5 492 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 ACAD11Q709F0 780 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.55
SPOP-202ENST00000393328 USP13Q92995 863 aaPredicted RBP11.58□□□□□ -0.55
SPOP-202ENST00000393328 LPPQ93052 612 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 CCDC106Q9BWC9 280 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 WWP1Q9H0M0 922 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 LHX5Q9H2C1 402 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 TMPRSS4Q9NRS4 437 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 ARHGEF38Q9NXL2 777 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 ITGA11Q9UKX5 1188 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 LZTS1Q9Y250 596 aa11.58□□□□□ -0.55
SPOP-202ENST00000393328 GOLGA8QA0A0J9YX86 632 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 GOLGA8OA6NCC3 632 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 E9PBE3 544 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 GOLGA8NF8WBI6 632 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 H3BSA7 217 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 H7C0C1 242 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 DCXO43602 365 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 KLHL41O60662 606 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 CLPTM1O96005 669 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 DARSP14868 501 aaKnown RBP11.58□□□□□ -0.56
SPOP-202ENST00000393328 GRM5P41594 1212 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 ABCG1P45844 678 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 ATP5OP48047 213 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 SLC18A1P54219 525 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 KRT81Q14533 505 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 SNX17Q15036 470 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 ICA1LQ8NDH6 482 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 GRIN3AQ8TCU5 1115 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 OLFM3Q96PB7 478 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 OXCT2Q9BYC2 517 aaPredicted RBP11.58□□□□□ -0.56
SPOP-202ENST00000393328 ARHGAP39Q9C0H5 1083 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 SOX13Q9UN79 622 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 HBS1LQ9Y450 684 aaKnown RBP11.58□□□□□ -0.56
SPOP-202ENST00000393328 SMIM28A0A1B0GU29 152 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 AIM2O14862 343 aa11.58□□□□□ -0.56
SPOP-202ENST00000393328 XPO1O14980 1071 aaKnown RBP11.58□□□□□ -0.56
SPOP-202ENST00000393328 ZSCAN9O15535 394 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms