RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 RC3H2Q9HBD1 1191 aaKnown RBP15.39■□□□□ 0.05
MKS1-202ENST00000393119 UBP1Q9NZI7 540 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 RCOR3Q9P2K3 495 aaPredicted RBP15.39■□□□□ 0.05
MKS1-202ENST00000393119 KCNU1A8MYU2 1149 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 DFFAO00273 331 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 GCATO75600 419 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 GJB5O95377 273 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 CA8P35219 290 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 MAGEA11P43364 429 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 KCNQ1P51787 676 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 SEC24CP53992 1094 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 XRCC4Q13426 336 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 KDM7AQ6ZMT4 941 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 ARHGEF18Q6ZSZ5 1173 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 PCGF5Q86SE9 256 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
MKS1-202ENST00000393119 RNF168Q8IYW5 571 aaPredicted RBP15.39■□□□□ 0.05
MKS1-202ENST00000393119 CFAP36Q96G28 342 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 TACO1Q9BSH4 297 aaKnown RBP15.39■□□□□ 0.05
MKS1-202ENST00000393119 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.39■□□□□ 0.05
MKS1-202ENST00000393119 MTRRQ9UBK8 725 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 F7P08709 466 aaPredicted RBP15.38■□□□□ 0.05
MKS1-202ENST00000393119 TUBP50607 506 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 SF3A3Q12874 501 aaKnown RBP eCLIP15.38■□□□□ 0.051e-6■■■■■ 34.6
MKS1-202ENST00000393119 AGBL2Q5U5Z8 902 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 SLC8B1Q6J4K2 584 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 PID1Q7Z2X4 250 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 RELL1Q8IUW5 271 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 UNC5BQ8IZJ1 945 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 GPATCH11Q8N954 259 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 FBF1Q8TES7 1133 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 EPAS1Q99814 870 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 SELENOSQ9BQE4 189 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 CYP4F11Q9HBI6 524 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 RRN3Q9NYV6 651 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 IL37Q9NZH6 218 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 MYO18AQ92614 2054 aaKnown RBP15.38■□□□□ 0.05
MKS1-202ENST00000393119 SLC12A8A0AV02 714 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 C5orf60A6NFR6 353 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 ZBTB24O43167 697 aaPredicted RBP15.38■□□□□ 0.05
MKS1-202ENST00000393119 PTPN3P26045 913 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 TBX4P57082 545 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 TMED2Q15363 201 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 ALFQ53S48 1182 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 PDIK1LQ8N165 341 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 SLC39A11Q8N1S5 342 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 SPPL2BQ8TCT7 592 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 APOL2Q9BQE5 337 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 FBXO44Q9H4M3 255 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 IL1RAPL1Q9NZN1 696 aa15.38■□□□□ 0.05
MKS1-202ENST00000393119 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
MKS1-202ENST00000393119 MYO16Q9Y6X6 1858 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 A0A0A0MRY4 1105 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 EXOC1LA0A1B0GW35 172 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 E9PAM4 449 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 H7C4K7 107 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 TRDMT1O14717 391 aaKnown RBP15.37■□□□□ 0.05
MKS1-202ENST00000393119 FAM155BO75949 473 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 SYN1P17600 705 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 CD68P34810 354 aaPredicted RBP15.37■□□□□ 0.05
MKS1-202ENST00000393119 MNAT1P51948 309 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 PPP2R2AP63151 447 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 ELAVL2Q12926 359 aaKnown RBP15.37■□□□□ 0.05
MKS1-202ENST00000393119 MPP2Q14168 576 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 C6orf118Q5T5N4 469 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 MICALCLQ6ZW33 695 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 NECAB2Q7Z6G3 386 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 ARHGAP12Q8IWW6 846 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 VPS52Q8N1B4 723 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 TTC16Q8NEE8 873 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 WBP2Q969T9 261 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 PGM2Q96G03 612 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 SLC39A13Q96H72 371 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 SPATA13Q96N96 652 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 YME1L1Q96TA2 773 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 SLC39A8Q9C0K1 460 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 SLC12A6Q9UHW9 1150 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 RABGEF1Q9UJ41 708 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 PATJQ8NI35 1801 aa15.37■□□□□ 0.05
MKS1-202ENST00000393119 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 FAM92AA1XBS5 289 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 CFAP69A5D8W1 941 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 E7ESA3 106 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 CHADO15335 359 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 TLR5O60602 858 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 CAPN15O75808 1086 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 LRRC14Q15048 493 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 PDK1Q15118 436 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 MFSD5Q6N075 450 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 OTOP3Q7RTS5 596 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 PALM2Q8IXS6 379 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 MGARPQ8TDB4 240 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 IGSF8Q969P0 613 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 TMEM169Q96HH4 297 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 ZNF558Q96NG5 402 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 OSBPL2Q9H1P3 480 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms