RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 KLK13Q9UKR3 277 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 ZZEF1O43149 2961 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 NYNRINQ9P2P1 1898 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 SART1O43290 800 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 GRAP2O75791 330 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 FGFR1OPO95684 399 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 TRUB2O95900 331 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 YWHAZP63104 245 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 NNTQ13423 1086 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 CDH18Q13634 790 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 E2F5Q15329 346 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 HSP90AA4PQ58FG1 418 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 CHSY1Q86X52 802 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 DHX40Q8IX18 779 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 C1orf216Q8TAB5 229 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 STK32AQ8WU08 396 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 POPDC2Q9HBU9 364 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 SIX2Q9NPC8 291 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 APEX2Q9UBZ4 518 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 SERGEFQ9UGK8 458 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 FNDC3AQ9Y2H6 1198 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 A0A1B0GVT2 93 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 SIN3BO75182 1162 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 LUC7L3O95232 432 aaKnown RBP17.17■□□□□ 0.34
PTPRK-208ENST00000392449 IGLV3-25P01717 112 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 PROS1P07225 676 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 TACR2P21452 398 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 PON1P27169 355 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 CSNK1EP49674 416 aaKnown RBP17.17■□□□□ 0.34
PTPRK-208ENST00000392449 PITRM1Q5JRX3 1037 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 ENOSF1Q7L5Y1 443 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 APCDD1Q8J025 514 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 SHC3Q92529 594 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 TTC17Q96AE7 1141 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 DDX50Q9BQ39 737 aaKnown RBP17.17■□□□□ 0.34
PTPRK-208ENST00000392449 PLCB1Q9NQ66 1216 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.17■□□□□ 0.34
PTPRK-208ENST00000392449 NFE2L3Q9Y4A8 694 aa17.17■□□□□ 0.34
PTPRK-208ENST00000392449 TYW5A2RUC4 315 aaKnown RBP17.16■□□□□ 0.34
PTPRK-208ENST00000392449 TTC34A8MYJ7 566 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 SEMA4FO95754 770 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 APOEP02649 317 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 DNTTP04053 509 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
PTPRK-208ENST00000392449 EXOC3L4Q17RC7 722 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 ZNF776Q68DI1 518 aaPredicted RBP17.16■□□□□ 0.34
PTPRK-208ENST00000392449 NAXDQ8IW45 347 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 DEFB106AQ8N104 65 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 C1orf131Q8NDD1 294 aaKnown RBP17.16■□□□□ 0.34
PTPRK-208ENST00000392449 BIRC7Q96CA5 298 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 THAP9Q9H5L6 903 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 GAREM1Q9H706 876 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 FAM204AQ9H8W3 233 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 SLCO3A1Q9UIG8 710 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 RALYQ9UKM9 306 aaKnown RBP17.16■□□□□ 0.34
PTPRK-208ENST00000392449 PLXNA2O75051 1894 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 KNL1Q8NG31 2342 aa17.16■□□□□ 0.34
PTPRK-208ENST00000392449 FAM47DPA6NHR8 397 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 H0Y626 953 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 FSBPO95073 299 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 ERBB2P04626 1255 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 GGCXP38435 758 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 STK19P49842 368 aaPredicted RBP17.15■□□□□ 0.34
PTPRK-208ENST00000392449 IRAK1P51617 712 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 ST8SIA6P61647 398 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 EIF4EBP2Q13542 120 aaPredicted RBP17.15■□□□□ 0.34
PTPRK-208ENST00000392449 MEA1Q16626 185 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 HLA-BQ31612 363 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 FAM183BPQ6ZVS7 135 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 BEND5Q7L4P6 421 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 CHCHD4Q8N4Q1 142 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 PNPLA1Q8N8W4 532 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 GATA6Q92908 595 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 BTN2A3PQ96KV6 586 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 RPL10LQ96L21 214 aaKnown RBP17.15■□□□□ 0.34
PTPRK-208ENST00000392449 IRX2Q9BZI1 471 aaPredicted RBP17.15■□□□□ 0.34
PTPRK-208ENST00000392449 BTBD1Q9H0C5 482 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 RSPH9Q9H1X1 276 aaPredicted RBP17.15■□□□□ 0.34
PTPRK-208ENST00000392449 DDIT4Q9NX09 232 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 SUN2Q9UH99 717 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 ERVW-1Q9UQF0 538 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 CEP83Q9Y592 693 aa17.15■□□□□ 0.34
PTPRK-208ENST00000392449 KCNK3O14649 394 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 MID1O15344 667 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 C7P10643 843 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 VAV1P15498 845 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 CENPCQ03188 943 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 TRIP6Q15654 476 aaKnown RBP17.14■□□□□ 0.33
PTPRK-208ENST00000392449 HNRNPA1L2Q32P51 320 aaKnown RBP17.14■□□□□ 0.33
PTPRK-208ENST00000392449 DPCR1Q3MIW9 517 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 KCNT1Q5JUK3 1230 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 C9orf64Q5T6V5 341 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 SLC47A2Q86VL8 602 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 MMAAQ8IVH4 418 aaKnown RBP17.14■□□□□ 0.33
PTPRK-208ENST00000392449 GANCQ8TET4 914 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 PPP1R13BQ96KQ4 1090 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 SLC2A13Q96QE2 648 aa17.14■□□□□ 0.33
PTPRK-208ENST00000392449 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms