RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PTPN9P43378 593 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 LMAN2Q12907 356 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 PTP4A2Q12974 167 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 LPAL2Q16609 132 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 PLK5Q496M5 336 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 C2CD6Q53TS8 623 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 SFMBT2Q5VUG0 894 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 TMEM215Q68D42 235 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 IRF2BP2Q7Z5L9 587 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 KBTBD6Q86V97 674 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 SLC30A5Q8TAD4 765 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 RPRD1AQ96P16 312 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-203ENST00000391855 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 HS3ST4Q9Y661 456 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 EML5Q05BV3 1969 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 FAM186AA6NE01 2351 aa13.08□□□□□ -0.31
GGPS1-203ENST00000391855 CLDN11O75508 207 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 ENDOD1O94919 500 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 KRT3P12035 628 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 CD70P32970 193 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 PBX1P40424 430 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 DPP6P42658 865 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 ST8SIA6P61647 398 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 LMNB2Q03252 620 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
GGPS1-203ENST00000391855 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 FUT11Q495W5 492 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 FNDC3BQ53EP0 1204 aaKnown RBP13.08□□□□□ -0.32
GGPS1-203ENST00000391855 PMS2CLQ68D20 193 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 ACAD10Q6JQN1 1059 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 DNAJC24Q6P3W2 148 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 LRRC31Q6UY01 552 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 SLC36A4Q6YBV0 504 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 METTL3Q86U44 580 aaKnown RBP13.08□□□□□ -0.32
GGPS1-203ENST00000391855 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
GGPS1-203ENST00000391855 CFAP52Q8N1V2 620 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 WFDC5Q8TCV5 224 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 C1orf74Q96LT6 269 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 SYT11Q9BT88 431 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 DUSP15Q9H1R2 295 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-203ENST00000391855 TMEM245Q9H330 911 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
GGPS1-203ENST00000391855 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
GGPS1-203ENST00000391855 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 EPHX1P07099 455 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 SRPRAP08240 638 aaKnown RBP13.07□□□□□ -0.32
GGPS1-203ENST00000391855 PDGFRAP16234 1089 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 NDUFV2P19404 249 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 PRKCHP24723 683 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 CDH4P55283 916 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 SULT2A1Q06520 285 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 PLEKHG6Q3KR16 790 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 PITRM1Q5JRX3 1037 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 LRSAM1Q6UWE0 723 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 DCLK2Q8N568 766 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 EMC1Q8N766 993 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 RXFP2Q8WXD0 754 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-203ENST00000391855 MYEOVQ96EZ4 313 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 MRGPRX1Q96LB2 322 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 HAPLN3Q96S86 360 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 SUN2Q9UH99 717 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 VANGL2Q9ULK5 521 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 CKAP5Q14008 2032 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 ITIH6Q6UXX5 1313 aa13.07□□□□□ -0.32
GGPS1-203ENST00000391855 ZFHX2Q9C0A1 2572 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-203ENST00000391855 SPAG17Q6Q759 2223 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 SIGLEC16A6NMB1 481 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 PRR5-ARHGAP8B1AHC4 643 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 WASH3PC4AMC7 463 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 ADCY5O95622 1261 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 C7P10643 843 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 GZMAP12544 262 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 TFE3P19532 575 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-203ENST00000391855 GPD1P21695 349 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 CSKP41240 450 aa13.06□□□□□ -0.32
GGPS1-203ENST00000391855 ARHGAP8P85298 464 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms