RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 STARD6P59095 220 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 OLR1P78380 273 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 GOLGA8DPQ0D2H9 430 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 MGAT5BQ3V5L5 792 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 CRY2Q49AN0 593 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 GLRA4Q5JXX5 417 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 MSANTD2Q6P1R3 559 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 DPP8Q6V1X1 898 aaPredicted RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 PPP1R32Q7Z5V6 425 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ZER1Q7Z7L7 766 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 CLEC10AQ8IUN9 316 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 SHISA5Q8N114 240 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 TMEM116Q8NCL8 245 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 SLC2A12Q8TD20 617 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 DUSP19Q8WTR2 217 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ASB11Q8WXH4 323 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 MRPS27Q92552 414 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 SAT2Q96F10 170 aaPredicted RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ZDHHC12Q96GR4 267 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 PDLIM5Q96HC4 596 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 VPS39Q96JC1 886 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 MEGF10Q96KG7 1140 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 C5orf34Q96MH7 638 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 TRIM6Q9C030 488 aaPredicted RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 TTC12Q9H892 705 aaPredicted RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 SIRT3Q9NTG7 399 aaPredicted RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ING3Q9NXR8 418 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 TUBE1Q9UJT0 475 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ADAMTS8Q9UP79 889 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 PTRH2Q9Y3E5 179 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ADAM18Q9Y3Q7 739 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 SNX11Q9Y5W9 270 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 AP1M2Q9Y6Q5 423 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 VWDEQ8N2E2 1590 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ITSN2Q9NZM3 1697 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 PLCH2O75038 1416 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CDC42BPBQ9Y5S2 1711 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 LRRD1A4D1F6 860 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 BTBD18B2RXH4 712 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 ZNF263O14978 683 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 PGRMC2O15173 223 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 RB1P06400 928 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TUBBP07437 444 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 HEXBP07686 556 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 ABCB1P08183 1280 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 DBHP09172 617 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CD6P30203 668 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 HOXA11P31270 313 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 SLC15A1P46059 708 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 PIP4K2AP48426 406 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 YBX1P67809 324 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 DUSP2Q05923 314 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 SCN1BQ07699 218 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TCF15Q12870 199 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 DUSP8Q13202 625 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 FHL3Q13643 280 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 NHSL2Q5HYW2 709 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TOR1AIP1Q5JTV8 583 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 UTP14CQ5TAP6 766 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 OLFML2BQ68BL8 750 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TMEM200BQ69YZ2 307 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 MAMDC4Q6UXC1 1216 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 OTOAQ7RTW8 1153 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 FRMD5Q7Z6J6 570 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 ANKS4BQ8N8V4 417 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 DTX3Q8N9I9 347 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 IL17RCQ8NAC3 791 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 MBD3L2Q8NHZ7 208 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CTCFLQ8NI51 663 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 BPIFB1Q8TDL5 484 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 NOC3LQ8WTT2 800 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 KCNE4Q8WWG9 221 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 MR1Q95460 341 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 SYAP1Q96A49 352 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CHFRQ96EP1 664 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 PGAM5Q96HS1 289 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 ZNF668Q96K58 619 aaPredicted RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 WDFY2Q96P53 400 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 FIZ1Q96SL8 496 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 FAM83CQ9BQN1 747 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TACO1Q9BSH4 297 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TASP1Q9H6P5 420 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 TLR8Q9NR97 1041 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 KCTD5Q9NXV2 234 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 ACTR3BQ9P1U1 418 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 SEC63Q9UGP8 760 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 VPS51Q9UID3 782 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 PPIEQ9UNP9 301 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CDYLQ9Y232 598 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 COL15A1P39059 1388 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 DNMT1P26358 1616 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 KIF14Q15058 1648 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CDK13Q14004 1512 aaKnown RBP6.76□□□□□ -1.33
TRAV35-201ENST00000390462 CNTLNQ9NXG0 1405 aa6.76□□□□□ -1.33
TRAV35-201ENST00000390462 PRXQ9BXM0 1461 aa6.75□□□□□ -1.33
TRAV35-201ENST00000390462 SHANK2Q9UPX8 1470 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms