RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 SLC26A11Q86WA9 606 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 PGLYRP2Q96PD5 576 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 SIK2Q9H0K1 926 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 NUDT5Q9UKK9 219 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 A0A1W2PQH9 124 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 CXorf49A8MYA2 514 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-202ENST00000390009 PITPNM1O00562 1244 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 SRGAP2BP0DMP2 458 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 CCR1P32246 355 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 FAAP100Q0VG06 881 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 SF3A3Q12874 501 aaKnown RBP eCLIP18.68■□□□□ 0.583e-7■■□□□ 14
ACTN4-202ENST00000390009 SLC1A5Q15758 541 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 NUP93Q8N1F7 819 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 OTUD6BQ8N6M0 293 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 ANKS4BQ8N8V4 417 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 DEPDC1BQ8WUY9 529 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 SEPT8Q92599 483 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 C8orf48Q96LL4 319 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 HAPLN3Q96S86 360 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 GPR62Q9BZJ7 368 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 LRFN2Q9ULH4 789 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 NEU3Q9UQ49 428 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 PCDHB5Q9Y5E4 795 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 GOLGA6L7A0A1B0GV03 622 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 GOLGA8RI6L899 631 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 TRIM66O15016 1216 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 MT-ND3P03897 115 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 TAC1P20366 129 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 FOXN2P32314 431 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 MRPL58Q14197 206 aaKnown RBP18.68■□□□□ 0.58
ACTN4-202ENST00000390009 RWDD4Q6NW29 188 aaKnown RBP18.68■□□□□ 0.58
ACTN4-202ENST00000390009 ALKBH8Q96BT7 664 aaKnown RBP18.68■□□□□ 0.58
ACTN4-202ENST00000390009 STAMBPL1Q96FJ0 436 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 KLF6Q99612 283 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-202ENST00000390009 SMYD2Q9NRG4 433 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 OSER1Q9NX31 292 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 SCML2Q9UQR0 700 aa18.68■□□□□ 0.58
ACTN4-202ENST00000390009 MTSS1O43312 755 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 SNX3O60493 162 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 PAGE1O75459 146 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 FAM155BO75949 473 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ZWINTO95229 277 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 MYCP01106 439 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ALDH2P05091 517 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ZKSCAN8Q15776 578 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 TCTN1Q2MV58 587 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 RNF187Q5TA31 235 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ZNF280DQ6N043 979 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 TRMT10BQ6PF06 316 aaKnown RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 BANPQ8N9N5 519 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 PIH1D1Q9NWS0 290 aaKnown RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 MARCH5Q9NX47 278 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 HCSTQ9UBK5 93 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ZNF180Q9UJW8 692 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 GRID1Q9ULK0 1009 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 FNDC1Q4ZHG4 1894 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 TANC1Q9C0D5 1861 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 WDR27A2RRH5 827 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 SDR42E2A6NKP2 422 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 CRADDP78560 199 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ITIH4Q14624 930 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 PPP2R5DQ14738 602 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 TTC39BQ5VTQ0 682 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 CASC4Q6P4E1 433 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 LVRNQ6Q4G3 990 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 MON1AQ86VX9 555 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 ATAD1Q8NBU5 361 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 APBB2Q92870 758 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
ACTN4-202ENST00000390009 SERAC1Q96JX3 654 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 FBXO44Q9H4M3 255 aa18.67■□□□□ 0.58
ACTN4-202ENST00000390009 FAM159BA6NKW6 160 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 OR6C75A6NL08 312 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 PQBP1O60828 265 aaKnown RBP18.66■□□□□ 0.58
ACTN4-202ENST00000390009 MAGEA11P43364 429 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 SLC11A1P49279 550 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 SESN2P58004 480 aaPredicted RBP18.66■□□□□ 0.58
ACTN4-202ENST00000390009 ZBTB17Q13105 803 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 HHATQ5VTY9 493 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 TTC9BQ8N6N2 239 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 SERPINB11Q96P15 392 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 GORASP1Q9BQQ3 440 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 RASSF4Q9H2L5 321 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 GREB1Q4ZG55 1949 aa18.66■□□□□ 0.58
ACTN4-202ENST00000390009 ZBTB24O43167 697 aaPredicted RBP18.65■□□□□ 0.58
ACTN4-202ENST00000390009 OAS1P00973 400 aaKnown RBP18.65■□□□□ 0.58
ACTN4-202ENST00000390009 CSH1P0DML2 217 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 CSH2P0DML3 217 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 FGFR3P22607 806 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 MGAT1P26572 445 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 USP46P62068 366 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 HTRA3P83110 453 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 STEAP4Q687X5 459 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 CCDC121Q6ZUS5 278 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 NPAS4Q8IUM7 802 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 TCP10LQ8TDR4 215 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 ARNTL2Q8WYA1 636 aa18.65■□□□□ 0.58
ACTN4-202ENST00000390009 FCRL2Q96LA5 508 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms