RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MSI1O43347 362 aaKnown RBP25.89■■□□□ 1.74
SHOX2-201ENST00000389589 NRG1Q02297 640 aaPredicted RBP25.89■■□□□ 1.74
SHOX2-201ENST00000389589 IKBKEQ14164 716 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 PKN2Q16513 984 aaKnown RBP25.89■■□□□ 1.74
SHOX2-201ENST00000389589 PID1Q7Z2X4 250 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 TBC1D31Q96DN5 1066 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 CFAP36Q96G28 342 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 SIGLEC10Q96LC7 697 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 EBNA1BP2Q99848 306 aaKnown RBP25.89■■□□□ 1.74
SHOX2-201ENST00000389589 PRMT1Q99873 361 aaKnown RBP25.89■■□□□ 1.74
SHOX2-201ENST00000389589 CLIC5Q9NZA1 410 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 KLHL8Q9P2G9 620 aaPredicted RBP25.89■■□□□ 1.74
SHOX2-201ENST00000389589 TRHDEQ9UKU6 1024 aa25.89■■□□□ 1.74
SHOX2-201ENST00000389589 SRGAP2BP0DMP2 458 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 PTPN3P26045 913 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 SLC18A1P54219 525 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 USP46P62068 366 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 EFTUD2Q15029 972 aaKnown RBP eCLIP25.89■■□□□ 1.73
SHOX2-201ENST00000389589 MANEALQ5VSG8 457 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 RWDD4Q6NW29 188 aaKnown RBP25.89■■□□□ 1.73
SHOX2-201ENST00000389589 LRRC8BQ6P9F7 803 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 CNKSR3Q6P9H4 555 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 LZTR1Q8N653 840 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 TTC9BQ8N6N2 239 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 DYDC1Q8WWB3 177 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 MRRFQ96E11 262 aaKnown RBP25.89■■□□□ 1.73
SHOX2-201ENST00000389589 SMC6Q96SB8 1091 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 GMIPQ9P107 970 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 IKBKGQ9Y6K9 419 aa25.89■■□□□ 1.73
SHOX2-201ENST00000389589 HAPLN1P10915 354 aaPredicted RBP25.88■■□□□ 1.73
SHOX2-201ENST00000389589 PSMB4P28070 264 aa25.88■■□□□ 1.73
SHOX2-201ENST00000389589 ALDH7A1P49419 539 aaKnown RBP25.88■■□□□ 1.73
SHOX2-201ENST00000389589 DCAKDQ8WVC6 231 aa25.88■■□□□ 1.73
SHOX2-201ENST00000389589 FBXO32Q969P5 355 aa25.88■■□□□ 1.73
SHOX2-201ENST00000389589 FCRL2Q96LA5 508 aaPredicted RBP25.88■■□□□ 1.73
SHOX2-201ENST00000389589 OLA1Q9NTK5 396 aaKnown RBP25.88■■□□□ 1.73
SHOX2-201ENST00000389589 SMG5Q9UPR3 1016 aaKnown RBP25.88■■□□□ 1.73
SHOX2-201ENST00000389589 NEU3Q9UQ49 428 aa25.88■■□□□ 1.73
SHOX2-201ENST00000389589 PRPF4O43172 522 aaKnown RBP eCLIP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 RPL10AP62906 217 aaKnown RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 MGAT5BQ3V5L5 792 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 RNF19BQ6ZMZ0 732 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 PDCD7Q8N8D1 485 aaKnown RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 C1orf74Q96LT6 269 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 TLR8Q9NR97 1041 aaKnown RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 NUDT5Q9UKK9 219 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 FAM47DPA6NHR8 397 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 KCNK1O00180 336 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 PBX3P40426 434 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 ITPRIPL1Q6GPH6 555 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 RSPO2Q6UXX9 243 aaPredicted RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 TMEM173Q86WV6 379 aaPredicted RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 SPATS2Q86XZ4 545 aaKnown RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 ANKRD42Q8N9B4 389 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 STKLD1Q8NE28 680 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 SLC44A1Q8WWI5 657 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 SLC39A13Q96H72 371 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 SGSM3Q96HU1 749 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 ZNF317Q96PQ6 595 aaPredicted RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 CEP41Q9BYV8 373 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 FAM107BQ9H098 131 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 SSU72Q9NP77 194 aaKnown RBP25.87■■□□□ 1.73
SHOX2-201ENST00000389589 TBX21Q9UL17 535 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 SLC27A5Q9Y2P5 690 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 TTLL3Q9Y4R7 772 aa25.87■■□□□ 1.73
SHOX2-201ENST00000389589 KBTBD12Q3ZCT8 623 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 CPLX4Q7Z7G2 160 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 BCL7CQ8WUZ0 217 aaPredicted RBP25.86■■□□□ 1.73
SHOX2-201ENST00000389589 SEPT5Q99719 369 aaPredicted RBP25.86■■□□□ 1.73
SHOX2-201ENST00000389589 MAD1L1Q9Y6D9 718 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 APOEP02649 317 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 PRKCHP24723 683 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 RFC2P35250 354 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 TBX4P57082 545 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 MPP2Q14168 576 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 USP41Q3LFD5 358 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.86■■□□□ 1.73
SHOX2-201ENST00000389589 TAS1R1Q7RTX1 841 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 CCNJLQ8IV13 435 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 MGARPQ8TDB4 240 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 CEP295NLQ96MC4 621 aa25.86■■□□□ 1.73
SHOX2-201ENST00000389589 IQANK1A0A1B0GTG1 560 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 UPP2O95045 317 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 VNN2O95498 520 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 EFEMP2O95967 443 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 INHBAP08476 426 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 DRD4P21917 467 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 GSDMBQ8TAX9 411 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 TSGA13Q96PP4 275 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 PCDHA11Q9Y5I1 949 aa25.85■■□□□ 1.73
SHOX2-201ENST00000389589 SDR42E2A6NKP2 422 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 ERI2A8K979 691 aaKnown RBP25.84■■□□□ 1.73
SHOX2-201ENST00000389589 GBP2P32456 591 aaPredicted RBP25.84■■□□□ 1.73
SHOX2-201ENST00000389589 GRIA1P42261 906 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 IFNAR2P48551 515 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 MLLT6P55198 1093 aaPredicted RBP25.84■■□□□ 1.73
SHOX2-201ENST00000389589 TEX44Q53QW1 395 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 UNC5AQ6ZN44 842 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 GPR152Q8TDT2 470 aa25.84■■□□□ 1.73
SHOX2-201ENST00000389589 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms