RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 GRAMD1AQ96CP6 724 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 MAGEB5Q9BZ81 275 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 TM6SF1Q9BZW5 370 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 MAGEH1Q9H213 219 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 NCKIPSDQ9NZQ3 722 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 TBC1D14Q9P2M4 693 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PCDHGB1Q9Y5G3 927 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PTGDR2Q9Y5Y4 395 aa2.89□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GAGE12JA6NER3 117 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 OR2W5A6NFC9 320 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 AREL1O15033 823 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 LINC01565O15544 149 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PLGP00747 810 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 LCATP04180 440 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 MYL4P12829 197 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 KRT10P13645 584 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PKMP14618 531 aaKnown RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PECAM1P16284 738 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 TGM2P21980 687 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GPS2Q13227 327 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CBFBQ13951 182 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GPR18Q14330 331 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 SLC5A9Q2M3M2 681 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ARHGAP15Q53QZ3 475 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 USP17L6PQ6QN14 398 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PRSS57Q6UWY2 283 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FAM83HQ6ZRV2 1179 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 KRT27Q7Z3Y8 459 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 KDELC2Q7Z4H8 507 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FOXP4Q8IVH2 680 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ADGRF3Q8IZF5 1079 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ATP11CQ8NB49 1132 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ZNF419Q96HQ0 510 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PCDHAC1Q9H158 963 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ZNF556Q9HAH1 456 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 IL21RQ9HBE5 538 aa2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PLEKHB1Q9UF11 243 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 G3BP2Q9UN86 482 aaKnown RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 UBE2J1Q9Y385 318 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FRMPD2Q68DX3 1309 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1040P-201ENST00000383974 A0A1B0GUV1 79 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CXorf65A6NEN9 183 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 SMTNL1A8MU46 457 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 NPC1O15118 1278 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 DHHO43323 396 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 SPRY3O43610 288 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 LDB3O75112 727 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 DDNO94850 711 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 VIPP01282 170 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CYP1A2P05177 515 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 TSHRP16473 764 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 EGR1P18146 543 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FGFR2P21802 821 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PDLIM4P50479 330 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 RASSF2P50749 326 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ERVFC1-1P60608 527 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ABATP80404 500 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 TRAF1Q13077 416 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ENTPD8Q5MY95 495 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CYB5RLQ6IPT4 315 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 MSANTD2Q6P1R3 559 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CCDC33Q8N5R6 958 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 EXD3Q8N9H8 876 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CCDC150Q8NCX0 1101 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 NUDT22Q9BRQ3 303 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 NUP62CLQ9H1M0 184 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 KCNK9Q9NPC2 374 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FBXO28Q9NVF7 368 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ERRFI1Q9UJM3 462 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ZMYND8Q9ULU4 1186 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FZD10Q9ULW2 581 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PCDHB7Q9Y5E2 793 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 EID1Q9Y6B2 187 aa2.87□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GXYLT2A0PJZ3 443 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 POM121BA6NF01 834 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 RHPN2P1A8MT19 583 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 KPNA5O15131 536 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 NEURL1O76050 574 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PPP1R3DO95685 299 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 NDST3O95803 873 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ARSBP15848 533 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GABRB3P28472 473 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 RFX5P48382 616 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CLCN5P51795 746 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 SHC2P98077 582 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PMPCAQ10713 525 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GALNT3Q14435 633 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 PLEKHG6Q3KR16 790 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FAM76BQ5HYJ3 339 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 C9orf57Q5W0N0 161 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 SLC16A12Q6ZSM3 486 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CADM3Q8N126 398 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 RNF152Q8N8N0 203 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 SRFBP1Q8NEF9 429 aaKnown RBP2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 GABPB2Q8TAK5 448 aaPredicted RBP2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 ADAMTS14Q8WXS8 1223 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 CDT1Q9H211 546 aa2.86□□□□□ -1.95
RNU6-1040P-201ENST00000383974 FSCN3Q9NQT6 498 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms