RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
DNMT3A-204ENST00000380756 LGMNQ99538 433 aa13□□□□□ -0.33
DNMT3A-204ENST00000380756 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
DNMT3A-204ENST00000380756 DDX18Q9NVP1 670 aaKnown RBP13□□□□□ -0.33
DNMT3A-204ENST00000380756 RRN3Q9NYV6 651 aa13□□□□□ -0.33
DNMT3A-204ENST00000380756 RIPK3Q9Y572 518 aa13□□□□□ -0.33
DNMT3A-204ENST00000380756 PDE4DIPQ5VU43 2346 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 BAZ2AQ9UIF9 1905 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 C2orf71A6NGG8 1288 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 MRASO14807 208 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 CLASP2O75122 1294 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 THP07101 528 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 CRABP2P29373 138 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 GSTT1P30711 240 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 NOS2P35228 1153 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 PCYT1AP49585 367 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 TBCELQ5QJ74 424 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 C10orf120Q5SQS8 335 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 SLC22A9Q8IVM8 553 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 WNT8BQ93098 351 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 PARK7Q99497 189 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 EIF2AQ9BY44 585 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 PCDH18Q9HCL0 1135 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 TRPC7Q9HCX4 862 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 GPRC5DQ9NZD1 345 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 RNF112Q9ULX5 631 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 SAC3D1A6NKF1 404 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 M0R3G1 203 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 STX7O15400 261 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 AHCYL1O43865 530 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 DEAF1O75398 565 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 TCEA3O75764 348 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 MYO1DO94832 1006 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 SGO1Q5FBB7 561 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 DRICH1Q6PGQ1 229 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 CYP2R1Q6VVX0 501 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 RBM15BQ8NDT2 890 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ZNF512Q96ME7 567 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 WDR41Q9HAD4 459 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 NT5MQ9NPB1 228 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 RNF19AQ9NV58 838 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ZNF229Q9UJW7 825 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 PCDHGB4Q9UN71 923 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 CLUHO75153 1309 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 LYPLA1O75608 230 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 RECQL4O94761 1208 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 USP1O94782 785 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 GJB1P08034 283 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 COX4I1P13073 169 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 GABRB2P47870 512 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ROR2Q01974 943 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 LPCAT2Q7L5N7 544 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 TNS4Q8IZW8 715 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 GSTCDQ8NEC7 633 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ZSCAN18Q8TBC5 510 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 STN1Q9H668 368 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 ADARB2Q9NS39 739 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 FAM8A1Q9UBU6 413 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 TRMT6Q9UJA5 497 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 PAIP2BQ9ULR5 123 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 SLC8A2Q9UPR5 921 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 VPS9D1Q9Y2B5 631 aa12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 PRG3Q9Y2Y8 225 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-204ENST00000380756 HDAC3O15379 428 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 FAM155BO75949 473 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 ERBB2P04626 1255 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 TPBGLP0DKB5 382 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 DNAJB2P25686 324 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 CHRNB3Q05901 458 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 MGAT5BQ3V5L5 792 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 SCARA3Q6AZY7 606 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 RAET1EQ8TD07 263 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 COPS5Q92905 334 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 FAM162AQ96A26 154 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 RBBP8Q99708 897 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 PRKD2Q9BZL6 878 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 APOBEC3GQ9HC16 384 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 ANKRD6Q9Y2G4 727 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 TGDSO95455 350 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 HIST1H2AGP0C0S8 130 aaPredicted RBP12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 GOT1P17174 413 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 HIST1H2ADP20671 130 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 BLMHQ13867 455 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 DHFR2Q86XF0 187 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 ATP6V0D2Q8N8Y2 350 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 HIST1H2AHQ96KK5 128 aa12.98□□□□□ -0.33
DNMT3A-204ENST00000380756 NR1H4Q96RI1 486 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms