RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RBAK-RBAKDNI3L0D1 243 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 YWHAQP27348 245 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 LRRC38Q5VT99 294 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 NMD3Q96D46 503 aaKnown RBP16.37■□□□□ 0.21
COL2A1-202ENST00000380518 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 TBL1YQ9BQ87 522 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 PORCNQ9H237 461 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 PIF1Q9H611 641 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 ENTPD7Q9NQZ7 604 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 C15orf38-AP3S2A0A0A6YYH1 394 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 VPS4BO75351 444 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 LTFP02788 710 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 STARD3Q14849 445 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 PARP6Q2NL67 630 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 TCHHL1Q5QJ38 904 aaPredicted RBP16.37■□□□□ 0.21
COL2A1-202ENST00000380518 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 CES3Q6UWW8 571 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 ARPINQ7Z6K5 226 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 GDPD5Q8WTR4 605 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 ROGDIQ9GZN7 287 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 KCNMB3Q9NPA1 279 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 WNT10BO00744 389 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 HOXC6P09630 235 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 TKTP29401 623 aaKnown RBP16.37■□□□□ 0.21
COL2A1-202ENST00000380518 PSMD7P51665 324 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 ANGPT1Q15389 498 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 PHKG1Q16816 387 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 NECAB2Q7Z6G3 386 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 ADAM32Q8TC27 787 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 TMEM159Q96B96 161 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 TMEM237Q96Q45 408 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 OSBPL10Q9BXB5 764 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 KLHL28Q9NXS3 571 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 DCXO43602 365 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 SYNCRIPO60506 623 aaKnown RBP16.37■□□□□ 0.21
COL2A1-202ENST00000380518 GJB6O95452 261 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 SNX32Q86XE0 403 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 FIG4Q92562 907 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 RMND5BQ96G75 393 aaPredicted RBP16.37■□□□□ 0.21
COL2A1-202ENST00000380518 MYLK2Q9H1R3 596 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 A1CFQ9NQ94 594 aaKnown RBP16.37■□□□□ 0.21
COL2A1-202ENST00000380518 KCNK4Q9NYG8 393 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 IPPQ9Y573 584 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
COL2A1-202ENST00000380518 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 CLOCKO15516 846 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 SAMD4BQ5PRF9 694 aaKnown RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 DACT2Q5SW24 774 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 TMC7Q7Z402 723 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 P2RX7Q99572 595 aaKnown RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 RHBDL2Q9NX52 303 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 ARMCX1Q9P291 453 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 ZNF839A8K0R7 811 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 CBX6O95503 412 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 MSH3P20585 1137 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 CNTN2Q02246 1040 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 PLEKHA7Q6IQ23 1121 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 KAT5Q92993 513 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 SH3BP4Q9P0V3 963 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 AGLP35573 1532 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 SIGLEC16A6NMB1 481 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 FAM220BPB1ANY3 271 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 MAP2K7O14733 419 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 DYRK3O43781 588 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 KATNA1O75449 491 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 STAU1O95793 577 aaKnown RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 ARMCX4Q5H9R4 360 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 OTUD3Q5T2D3 398 aaPredicted RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 LRRC55Q6ZSA7 311 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 COPG2Q9UBF2 871 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 TRPC4Q9UBN4 977 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 PDHXO00330 501 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 ETS1P14921 441 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 FKBP1AP62942 108 aaKnown RBP16.36■□□□□ 0.21
COL2A1-202ENST00000380518 MFSD10Q14728 455 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 ZCCHC23Q6ZST2 131 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 TMEM26Q6ZUK4 368 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 UNC93AQ86WB7 457 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 EID3Q8N140 333 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 SPPL2AQ8TCT8 520 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 MKL1Q969V6 931 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 CENPTQ96BT3 561 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 ATXN3LQ9H3M9 355 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 RABGEF1Q9UJ41 708 aa16.36■□□□□ 0.21
COL2A1-202ENST00000380518 CHADO15335 359 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 SLC45A4Q5BKX6 768 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 LPCAT2Q7L5N7 544 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 TMEM86AQ8N2M4 240 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 OR6Y1Q8NGX8 325 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 MCOLN3Q8TDD5 553 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 MRPL48Q96GC5 212 aaKnown RBP16.35■□□□□ 0.21
COL2A1-202ENST00000380518 ZCCHC2Q9C0B9 1178 aaKnown RBP16.35■□□□□ 0.21
COL2A1-202ENST00000380518 OSGEPL1Q9H4B0 414 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 RERGLQ9H628 205 aa16.35■□□□□ 0.21
COL2A1-202ENST00000380518 DPP7Q9UHL4 492 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms