RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 FAM92AA1XBS5 289 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 A8MUI8 341 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 HHLA1C9JL84 531 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 H3BNC9 293 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 CALB1P05937 261 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 BRD2P25440 801 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 ETV4P43268 484 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TAP1Q03518 808 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PAN2Q504Q3 1202 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PPP1R26Q5T8A7 1209 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 FAM171A1Q5VUB5 890 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 GRAMD1AQ96CP6 724 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM169Q96HH4 297 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 HEXIM2Q96MH2 286 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM237Q96Q45 408 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 RHOBTB2Q9BYZ6 727 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 FRMD8P1Q9BZ68 369 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 UBE2OQ9C0C9 1292 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 IGSF5Q9NSI5 407 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 VTI1BQ9UEU0 232 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TSPAN16Q9UKR8 245 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TCRBV7S3A2A0A539 114 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PI4K2BG5E9Z4 385 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 SNPHO15079 494 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM63AO94886 807 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 VIMP08670 466 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 NPR3P17342 541 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 GNAZP19086 355 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 RPA3P35244 121 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 MNAT1P51948 309 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 LMNB2Q03252 620 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PIGHQ14442 188 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 EFTUD2Q15029 972 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PARP6Q2NL67 630 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 LRIT3Q3SXY7 679 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 FAM133BQ5BKY9 247 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 NUGGCQ68CJ6 796 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 BBS12Q6ZW61 710 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 CCDC91Q7Z6B0 441 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 ACOT1Q86TX2 421 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 FAM35AQ86V20 835 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TTC30AQ86WT1 665 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 XYLT1Q86Y38 959 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 CMASQ8NFW8 434 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 JOSD2Q8TAC2 188 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 AGAP11Q8TF27 550 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 IRGQQ8WZA9 623 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 RTP4Q96DX8 246 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PCED1BQ96HM7 432 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 MLXIPLQ9NP71 852 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 NGRNQ9NPE2 291 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 DDX56Q9NY93 547 aaKnown RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 TRIM33Q9UPN9 1127 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 PRG3Q9Y2Y8 225 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-202ENST00000379996 OBSL1O75147 1896 aa7.98□□□□□ -1.13
CDKL5-202ENST00000379996 SIGLEC16A6NMB1 481 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 H0YHG0 523 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 BANF1O75531 89 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 SUN1O94901 812 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 TJP3O95049 919 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 ERBB2P04626 1255 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 TSHRP16473 764 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 NDUFV1P49821 464 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 NEK3P51956 506 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 SH3BP2P78314 561 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 ORC1Q13415 861 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 GOLGA7BQ2TAP0 167 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 DENND1BQ6P3S1 775 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 PPP1R21Q6ZMI0 780 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 ARHGEF18Q6ZSZ5 1173 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 SRRM1Q8IYB3 904 aaKnown RBP7.97□□□□□ -1.13
CDKL5-202ENST00000379996 CCDC63Q8NA47 563 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 GDAP1Q8TB36 358 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 MCRS1Q96EZ8 462 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 PEBP4Q96S96 227 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 MYLK2Q9H1R3 596 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 A0A1W2PPM1 405 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 LCHNA4D1U4 455 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM229AB2RXF0 380 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 VNN2O95498 520 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 GM2AP17900 193 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 MAGEA6P43360 314 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 KCNJ11Q14654 390 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 CLEC20AQ6ZU45 233 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 TAS1R1Q7RTX1 841 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 BPHLQ86WA6 291 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-202ENST00000379996 MAB21L3Q8N8X9 362 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 BANPQ8N9N5 519 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 SPPL3Q8TCT6 385 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 MGARPQ8TDB4 240 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 OVCA2Q8WZ82 227 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 MYLPFQ96A32 169 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 CFAP57Q96MR6 1250 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 ACSS3Q9H6R3 686 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 LMCD1Q9NZU5 365 aa7.97□□□□□ -1.13
CDKL5-202ENST00000379996 AFF4Q9UHB7 1163 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms