RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 WASHC5Q12768 1159 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 EBNA1BP2Q99848 306 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 NRDE2Q9H7Z3 1164 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 CDH22Q9UJ99 828 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 PIN4Q9Y237 131 aaKnown RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 CAPN8A6NHC0 703 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 DYNC1LI2O43237 492 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-202ENST00000379826 EEF1DP3Q658K8 133 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 ZPBP2Q6X784 338 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 ZNF786Q8N393 782 aa11.66□□□□□ -0.54
SMAD9-202ENST00000379826 PDHXO00330 501 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 PMM2O15305 246 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 HNRNPRO43390 633 aaKnown RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GOT1P17174 413 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 ASPAP45381 313 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GABRB2P47870 512 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 CACNB2Q08289 660 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 PTK2BQ14289 1009 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GSTA3Q16772 222 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 CNPY1Q3B7I2 92 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 DRICH1Q6PGQ1 229 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 ELOVL4Q9GZR5 314 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 PHGDHO43175 533 aaKnown RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 SIN3BO75182 1162 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GCAP28676 217 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 DGKDQ16760 1214 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 PCDH20Q8N6Y1 951 aaKnown RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 ENDOVQ8N8Q3 282 aaKnown RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 C7orf26Q96N11 449 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 YME1L1Q96TA2 773 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 EML4Q9HC35 981 aaKnown RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 C3orf70A6NLC5 250 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 MAGEC1O60732 1142 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 ITGA2BP08514 1039 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 T-ENOLP0DO92 83 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 NCAM1P13591 858 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 UQCRBP14927 111 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GRAMD4Q6IC98 578 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 CHST13Q8NET6 341 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 OR6P1Q8NGX9 317 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 COPS5Q92905 334 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 FAM136AQ96C01 138 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 STRA6Q9BX79 667 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 CCDC68Q9H2F9 335 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 GSTA4O15217 222 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 PAPSS1O43252 624 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 SETSIPP0DME0 302 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 EPHA3P29320 983 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 FAM83AQ86UY5 434 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 TTC39CQ8N584 583 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 DENND1AQ8TEH3 1009 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.54
SMAD9-202ENST00000379826 DRC3Q9H069 523 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 SNTG2Q9NY99 539 aa11.65□□□□□ -0.54
SMAD9-202ENST00000379826 ARHGEF37A1IGU5 675 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 ABLIM1O14639 778 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 FESP07332 822 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 FAM200BP0CF97 657 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 CRHR1P34998 444 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 GRIA1P42261 906 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 CCDC153Q494R4 210 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 KCNMB4Q86W47 210 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 CHSY1Q86X52 802 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 FBXW8Q8N3Y1 598 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 PCSK9Q8NBP7 692 aaKnown RBP11.65□□□□□ -0.55
SMAD9-202ENST00000379826 APBB2Q92870 758 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 SDCCAG3Q96C92 435 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 CELF6Q96J87 481 aaKnown RBP11.65□□□□□ -0.55
SMAD9-202ENST00000379826 NDNQ99608 321 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 CPNE1Q99829 537 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 COG4Q9H9E3 785 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 EFCAB1Q9HAE3 211 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 ARHGEF38Q9NXL2 777 aa11.65□□□□□ -0.55
SMAD9-202ENST00000379826 SPATA31C2B4DYI2 1134 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 TSHRP16473 764 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 CA9Q16790 459 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 PACS1Q6VY07 963 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 METTL23Q86XA0 190 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 PLD5Q8N7P1 536 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 LRRC40Q9H9A6 602 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 PCDH18Q9HCL0 1135 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 SLC7A8Q9UHI5 535 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 BIRC5O15392 142 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 PLA2G6O60733 806 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 GM2AP17900 193 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 GP5P40197 560 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 MPP3Q13368 585 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 FUT11Q495W5 492 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 PPP1R26Q5T8A7 1209 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-202ENST00000379826 APBA2Q99767 749 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 LPIN3Q9BQK8 851 aa11.64□□□□□ -0.55
SMAD9-202ENST00000379826 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms