RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 NPWQ8N729 165 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 RTP4Q96DX8 246 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 GCNAQ96QF7 691 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 SIK2Q9H0K1 926 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 TLE6Q9H808 572 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 EPB41L5Q9HCM4 733 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 ZNF212Q9UDV6 495 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 UTP11Q9Y3A2 253 aaKnown RBP12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 HEY1Q9Y5J3 304 aa12.36□□□□□ -0.43
EXOSC9-202ENST00000379663 BRWD1Q9NSI6 2320 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 ANKRD36A6QL64 1941 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 BCLAF3A2AJT9 711 aaKnown RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 DRGXA6NNA5 263 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 ACSL4O60488 711 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 KLKB1P03952 638 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 RHOP08100 348 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 HMBSP08397 361 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 MBL2P11226 248 aaPredicted RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 DDX6P26196 483 aaKnown RBP eCLIP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 IVDP26440 423 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 SERPINB6P35237 376 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 GDF10P55107 478 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 CUL1Q13616 776 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 BRD3Q15059 726 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 KCTD19Q17RG1 926 aaPredicted RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 SLC5A9Q2M3M2 681 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 STXBP5Q5T5C0 1151 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 Q6ZNB5 142 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 BZW1Q7L1Q6 419 aaKnown RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 IFT20Q8IY31 132 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 ARL14EPQ8N8R7 260 aaPredicted RBP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 GLIS1Q8NBF1 620 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 WBP2Q969T9 261 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 CCDC114Q96M63 670 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 QKIQ96PU8 341 aaKnown RBP eCLIP12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 CYP2S1Q96SQ9 504 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 PCDH9Q9HC56 1237 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 VANGL2Q9ULK5 521 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 ZNF148Q9UQR1 794 aa12.35□□□□□ -0.43
EXOSC9-202ENST00000379663 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 CFAP69A5D8W1 941 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 HACD1B0YJ81 288 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 RFXAPO00287 272 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 TP73O15350 636 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 DAPK3O43293 454 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 MAP3K6O95382 1288 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 GLP2RO95838 553 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 SRGAP2BP0DMP2 458 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 MYL4P12829 197 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 HDCP19113 662 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 CORO1AP31146 461 aaKnown RBP12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 SLC6A4P31645 630 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 PRKD1Q15139 912 aaPredicted RBP12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 PPP1R7Q15435 360 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 TRADDQ15628 312 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 AFMIDQ63HM1 303 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 FBXL22Q6P050 247 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 TMEM184AQ6ZMB5 413 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 CCNI2Q6ZMN8 369 aaPredicted RBP12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 ZC3H18Q86VM9 953 aaKnown RBP12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 FAM217AQ8IXS0 508 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 RTL3Q8N8U3 475 aaKnown RBP12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 MAB21L3Q8N8X9 362 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 TCEAL4Q96EI5 215 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 SLC46A2Q9BY10 475 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 ZYG11BQ9C0D3 744 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 RETREG1Q9H6L5 497 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 SFXN1Q9H9B4 322 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 USP29Q9HBJ7 922 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 FAM114A2Q9NRY5 505 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 GKN1Q9NS71 199 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 DZANK1Q9NVP4 752 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 TMEM248Q9NWD8 314 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 GRHL1Q9NZI5 618 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 ZMYM5Q9UJ78 669 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 CPQQ9Y646 472 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 EYSQ5T1H1 3165 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
EXOSC9-202ENST00000379663 TRAV19A0A0A6YYK7 116 aa12.33□□□□□ -0.44
EXOSC9-202ENST00000379663 A0A1W2PPC1 479 aa12.33□□□□□ -0.44
EXOSC9-202ENST00000379663 GFRA2O00451 464 aa12.33□□□□□ -0.44
EXOSC9-202ENST00000379663 NCAM2O15394 837 aa12.33□□□□□ -0.44
EXOSC9-202ENST00000379663 KRT14P02533 472 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms