RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 C2orf81A6NN90 581 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 STK32AQ8WU08 396 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 UBXN6Q9BZV1 441 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 YY1AP1Q9H869 796 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PHTF1Q9UMS5 762 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PCDHB8Q9UN66 801 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 C2CD4BA6NLJ0 364 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 GLRA3O75311 464 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 VAPBO95292 243 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 ANP32DO95626 131 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PEX5P50542 639 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 FAAP100Q0VG06 881 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PSMD5Q16401 504 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 LRRC36Q1X8D7 754 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 FAM83EQ2M2I3 478 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 ZNF618Q5T7W0 954 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 TMA16Q96EY4 203 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 FCRL2Q96LA5 508 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 CSPG4P5Q96PW8 444 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 SCOCQ9UIL1 159 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 SCN7AQ01118 1682 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PAPPAQ13219 1627 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 CCT8L1PA6NM43 557 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 TLR5O60602 858 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 RHOBTB1O94844 696 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 RABGGTBP53611 331 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 CDK16Q00536 496 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 TIGD5Q53EQ6 642 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 HECTD3Q5T447 861 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 NUDT18Q6ZVK8 323 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 SERPINI1Q99574 410 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 TTPALQ9BTX7 342 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 MRPL17Q9NRX2 175 aaKnown RBP14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 SLC4A7Q9Y6M7 1214 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 MYH11P35749 1972 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 PTP4A2Q12974 167 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 KRT33BQ14525 404 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 PTAR1Q7Z6K3 402 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 PLD5Q8N7P1 536 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 OR52K1Q8NGK4 314 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 FAM124BQ9H5Z6 455 aaPredicted RBP14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 CDY1Q9Y6F8 540 aa14.52□□□□□ -0.08
SHROOM1-203ENST00000378679 OR6C75A6NL08 312 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 CHADO15335 359 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 CCND3P30281 292 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 GP5P40197 560 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 AUHQ13825 339 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 INTS6LQ5JSJ4 861 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 TEKT4Q8WW24 435 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 USP6NLQ92738 828 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 LRRC39Q96DD0 335 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 WDR70Q9NW82 654 aa14.52□□□□□ -0.09
SHROOM1-203ENST00000378679 MAGEB16A2A368 324 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 MSI1O43347 362 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 ENO1P06733 434 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 STMN1P16949 149 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 SH3PXD2AQ5TCZ1 1133 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 RETSATQ6NUM9 610 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 TCP10LQ8TDR4 215 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 ACBD6Q9BR61 282 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 CIPCQ9C0C6 399 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 DDX60Q8IY21 1712 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 TAF10Q12962 218 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 NOMO1Q15155 1222 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 ARHGAP17Q68EM7 881 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 HERC6Q8IVU3 1022 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 SPPL2BQ8TCT7 592 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 PRCCQ92733 491 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 NKD2Q969F2 451 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 CCDC124Q96CT7 223 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 FAM161BQ96MY7 647 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 STRA6Q9BX79 667 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 UBE2OQ9C0C9 1292 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 NEUROG2Q9H2A3 272 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 PRDM16Q9HAZ2 1276 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 PDLIM7Q9NR12 457 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 CRLS1Q9UJA2 301 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 ACOT9Q9Y305 439 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 IGKV6-21A0A0C4DH24 114 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 NFKB1P19838 968 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 SPDYCQ5MJ68 293 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 PSTKQ8IV42 348 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 CLEC4CQ8WTT0 213 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 P2RY11Q96G91 374 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 SHCBP1LQ9BZQ2 653 aa14.51□□□□□ -0.09
SHROOM1-203ENST00000378679 FGF10O15520 208 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 HDCP19113 662 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 IMPG1Q17R60 797 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 TTC23LQ6PF05 361 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 VSTM1Q6UX27 236 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 MAGEB18Q96M61 343 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 ARHGAP39Q9C0H5 1083 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 MPP6Q9NZW5 540 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 DCDC2Q9UHG0 476 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 ADAM28Q9UKQ2 775 aa14.5□□□□□ -0.09
SHROOM1-203ENST00000378679 BAG5Q9UL15 447 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms