RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 NMRK1Q9NWW6 199 aa11.54□□□□□ -0.56
RPGR-203ENST00000378505 SALL4Q9UJQ4 1053 aa11.54□□□□□ -0.56
RPGR-203ENST00000378505 ZNF229Q9UJW7 825 aa11.54□□□□□ -0.56
RPGR-203ENST00000378505 ADGRA3Q8IWK6 1321 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 NRCAMQ92823 1304 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 FCGR1AP12314 374 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 AKR1A1P14550 325 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 CLK1P49759 484 aaKnown RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 TMC7Q7Z402 723 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 PIGZQ86VD9 579 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 IRF6O14896 467 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 CCNE2O96020 404 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 USP17L7P0C7H9 530 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 MYL4P12829 197 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 NPR3P17342 541 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 ME2P23368 584 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 NUP107P57740 925 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 PCBP1Q15365 356 aaKnown RBP eCLIP11.53□□□□□ -0.56
RPGR-203ENST00000378505 SHROOM1Q2M3G4 852 aaPredicted RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 ANKS6Q68DC2 871 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 IYDQ6PHW0 289 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 MICU2Q8IYU8 434 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 LRRC57Q8N9N7 239 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 ACMSDQ8TDX5 336 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 SEPT8Q92599 483 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 PWWP2AQ96N64 755 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 CDK5RAP1Q96SZ6 601 aaKnown RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 UNKQ9C0B0 810 aaKnown RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 UTP6Q9NYH9 597 aaKnown RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 POLG2Q9UHN1 485 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 CROTQ9UKG9 612 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 EFR3BQ9Y2G0 817 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 TCHHQ07283 1943 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 ERVK-10P10266 1014 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 MAPK1P28482 360 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 OR1E1P30953 314 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 PPIL2Q13356 520 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 NEPROQ6NW34 567 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 CRELD2Q6UXH1 353 aaPredicted RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 ABHD15Q6UXT9 468 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 LRRC74BQ6ZQY2 392 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 TRABD2AQ86V40 505 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 PPP1R10Q96QC0 940 aaKnown RBP11.53□□□□□ -0.56
RPGR-203ENST00000378505 ATXN3LQ9H3M9 355 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 RMND5AQ9H871 391 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 ERVK-5Q9HDB9 667 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 XPNPEP3Q9NQH7 507 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 TAS2R13Q9NYV9 303 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 OR12D3Q9UGF7 316 aa11.53□□□□□ -0.56
RPGR-203ENST00000378505 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 ENDOD1O94919 500 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 CYP1A1P04798 512 aaPredicted RBP11.52□□□□□ -0.56
RPGR-203ENST00000378505 PSMB4P28070 264 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 S100A5P33763 92 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 SKIV2L2P42285 1042 aaKnown RBP11.52□□□□□ -0.56
RPGR-203ENST00000378505 PCYT1AP49585 367 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 CACNA2D1P54289 1103 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 RETSATQ6NUM9 610 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 ZFP1Q6P2D0 407 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 SNX32Q86XE0 403 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 ARRDC4Q8NCT1 418 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 TBL1YQ9BQ87 522 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 PHACTR1Q9C0D0 580 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 AAASQ9NRG9 546 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 SNCAIPQ9Y6H5 919 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 DISP2A7MBM2 1401 aa11.52□□□□□ -0.56
RPGR-203ENST00000378505 PIGNO95427 931 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 BDNFP23560 247 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 YWHAQP27348 245 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 FLT3P36888 993 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 MSLNQ13421 630 aaPredicted RBP11.52□□□□□ -0.57
RPGR-203ENST00000378505 NR6A1Q15406 480 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 GPR141Q7Z602 305 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 TTC30AQ86WT1 665 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 EBNA1BP2Q99848 306 aaKnown RBP11.52□□□□□ -0.57
RPGR-203ENST00000378505 SH3GL2Q99962 352 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 PRDM12Q9H4Q4 367 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 BAIAP3O94812 1187 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 PROCP04070 461 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 TRPC1P48995 793 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 NEK2P51955 445 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 BST1Q10588 318 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 ARHGAP15Q53QZ3 475 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 WSCD1Q658N2 575 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 APTXQ7Z2E3 356 aaKnown RBP11.52□□□□□ -0.57
RPGR-203ENST00000378505 FBXO39Q8N4B4 442 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 CARNMT1Q8N4J0 409 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 HELQQ8TDG4 1101 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 CERS2Q96G23 380 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 TRPV2Q9Y5S1 764 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 IGKV6D-41A0A0C4DH26 115 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
RPGR-203ENST00000378505 PRIM2P49643 509 aa11.52□□□□□ -0.57
RPGR-203ENST00000378505 FASTKQ14296 549 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms