RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CEP78Q5JTW2 689 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 WLSQ5T9L3 541 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 NLRP9Q7RTR0 991 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 VPS37AQ8NEZ2 397 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 LPCAT1Q8NF37 534 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 SERPINB12Q96P63 405 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ZCWPW1Q9H0M4 648 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 KLF15Q9UIH9 416 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 PRDM4Q9UKN5 801 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ACKR2O00590 384 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 MAGEC1O60732 1142 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ALPPL2P10696 532 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GABRR2P28476 465 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 NUDT2P50583 147 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 RIBC1Q8N443 379 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF655Q8N720 491 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 SYN2Q92777 582 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 CNDP1Q96KN2 507 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 RPS6KB2Q9UBS0 482 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 DMGDHQ9UI17 866 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 DNMT3LQ9UJW3 386 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3DA0A087WVF3 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3IA0A087WXS9 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3EA0A087X179 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3KA0A087X1G2 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3FA6NER0 549 aaPredicted RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3LB9A6J9 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 USP2O75604 605 aaPredicted RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3HP0C7X1 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 RBP3P10745 1247 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 COILP38432 576 aaPredicted RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 HSPA13P48723 471 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3GQ6DHY5 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3CQ6IPX1 549 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D3Q8IZP1 549 aaPredicted RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 C4orf32Q8N8J7 132 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 EXD1Q8NHP7 514 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 ETNPPLQ8TBG4 499 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 LPPQ93052 612 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TMEM176AQ96HP8 235 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 ASB7Q9H672 318 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 EXOSC4Q9NPD3 245 aaKnown RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 SRRDQ9UH36 339 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 ROBO1Q9Y6N7 1651 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 NFATC1O95644 943 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 NPY2RP49146 381 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 SERPINB9P50453 376 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 C6orf10Q5SRN2 563 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 HEATR4Q86WZ0 1026 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 MAGEB18Q96M61 343 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TMEM51Q9NW97 253 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 AAR2Q9Y312 384 aaKnown RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 LMO7Q8WWI1 1683 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 CLASP2O75122 1294 aaKnown RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 UBOX5O94941 541 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 CDC16Q13042 620 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TRADDQ15628 312 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 UAP1L1Q3KQV9 507 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 NIPA1Q7RTP0 329 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 NRSN1Q8IZ57 195 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 PPCSQ9HAB8 311 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 NT5MQ9NPB1 228 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 FAM32AQ9Y421 112 aaKnown RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 LGR5O75473 907 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 BMP10O95393 424 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 CYP3A4P08684 503 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 SNRPAP09012 282 aaKnown RBP11.05□□□□□ -0.64
HIF3A-205ENST00000377670 PAX3P23760 479 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 IZUMO2Q6UXV1 221 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 DENND5BQ6ZUT9 1274 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TMEM161AQ9NX61 479 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 RRN3Q9NYV6 651 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TAS2R14Q9NYV8 317 aa11.05□□□□□ -0.64
HIF3A-205ENST00000377670 TLE2Q04725 743 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 GRIK3Q13003 919 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 TFAP2DQ7Z6R9 452 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 NT5DC3Q86UY8 548 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 MICU2Q8IYU8 434 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 BTN2A2Q8WVV5 523 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 FAM162AQ96A26 154 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 C2orf49Q9BVC5 232 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 MARCH2Q9P0N8 246 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 GTF3C4Q9UKN8 822 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 ADGRA2Q96PE1 1338 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF839A8K0R7 811 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 MLNP12872 115 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 CDH2P19022 906 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms