RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CCR10P46092 362 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 IRF9Q00978 393 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 PDK1Q15118 436 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 C9orf131Q5VYM1 1079 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP11-204ENST00000377107 PNPLA1Q8N8W4 532 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 TEKT4Q8WW24 435 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 NRG4Q8WWG1 115 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 TASP1Q9H6P5 420 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 MTMR10Q9NXD2 777 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 CPA3P15088 417 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 ATP6V1C1P21283 382 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 PRKCHP24723 683 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 MATKP42679 507 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 SLC26A9Q7LBE3 791 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 DCLK2Q8N568 766 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 TTC39CQ8N584 583 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 SNX27Q96L92 541 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 CHRAC1Q9NRG0 131 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
USP11-204ENST00000377107 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 LNPEPQ9UIQ6 1025 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 PPP1R12AO14974 1030 aaPredicted RBP13.26□□□□□ -0.29
USP11-204ENST00000377107 HNRNPCL1O60812 293 aaKnown RBP13.26□□□□□ -0.29
USP11-204ENST00000377107 OPHN1O60890 802 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 GCATO75600 419 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 MMP3P08254 477 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 SMIM10L2AP0DMW4 78 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 SMIM10L2BP0DMW5 78 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 CYP2B6P20813 491 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 CRHR1P34998 444 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 CCNHP51946 323 aaPredicted RBP13.26□□□□□ -0.29
USP11-204ENST00000377107 RABGAP1LQ5R372 815 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 MARCH8Q5T0T0 291 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 DEFB107AQ8IZN7 70 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 IPMKQ8NFU5 416 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 QKIQ96PU8 341 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP11-204ENST00000377107 FRMD8Q9BZ67 464 aaPredicted RBP13.26□□□□□ -0.29
USP11-204ENST00000377107 WDR55Q9H6Y2 383 aaPredicted RBP13.26□□□□□ -0.29
USP11-204ENST00000377107 SCOCQ9UIL1 159 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 TLK1Q9UKI8 766 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 VANGL2Q9ULK5 521 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 FAM159BA6NKW6 160 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 NRP1O14786 923 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 GLRA3O75311 464 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 WFS1O76024 890 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 SNAI1O95863 264 aaPredicted RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 GJA5P36382 358 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 OCRLQ01968 901 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 POU5F1BQ06416 359 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 ITKQ08881 620 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 POU6F1Q14863 301 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PLD6Q8N2A8 252 aaKnown RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 APBA2Q99767 749 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 VCXQ9H320 206 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 SLC7A8Q9UHI5 535 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PLA2G4CQ9UP65 541 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 A0A096LPK6 155 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 YJEFN3A6XGL0 299 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 E7ENQ6 273 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 ZBTB24O43167 697 aaPredicted RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 MT-CO1P00395 513 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 MX2P20592 715 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PPIL2Q13356 520 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PCSK7Q16549 785 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 KYAT1Q16773 422 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 CERS2Q96G23 380 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PLEKHA5Q9HAU0 1116 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 SNX15Q9NRS6 342 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 CNTN3Q9P232 1028 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 ANGPTL2Q9UKU9 493 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 TGDSO95455 350 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 TSHRP16473 764 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 FDFT1P37268 417 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 NR2C2P49116 596 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 AFF1P51825 1210 aaKnown RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 AP2B1P63010 937 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 ASPHQ12797 758 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 BLMHQ13867 455 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 HSF5Q4G112 596 aaPredicted RBP13.25□□□□□ -0.29
USP11-204ENST00000377107 SPDYAQ5MJ70 313 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 PDPK2PQ6A1A2 396 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 SH2D5Q6ZV89 423 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 LRRC39Q96DD0 335 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 GAD1Q99259 594 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 OMDQ99983 421 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 SYT15Q9BQS2 421 aa13.25□□□□□ -0.29
USP11-204ENST00000377107 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms