RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TSSK1BQ9BXA7 367 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 MYLK2Q9H1R3 596 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 TMLHEQ9NVH6 421 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 IGSF9Q9P2J2 1179 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 M0QZQ0 153 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 SKIP12755 728 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 PGAM1P18669 254 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 CXCR3P49682 368 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 ELF3P78545 371 aaPredicted RBP20.77■□□□□ 0.92
VSX1-202ENST00000376709 OVGP1Q12889 678 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 ICE2Q659A1 982 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 STEAP4Q687X5 459 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 PM20D1Q6GTS8 502 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 CDHR3Q6ZTQ4 885 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 CCNJLQ8IV13 435 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 THEM5Q8N1Q8 247 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 OR10T2Q8NGX3 314 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 RSPH1Q8WYR4 309 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 CDKL2Q92772 493 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 CHKBQ9Y259 395 aa20.77■□□□□ 0.92
VSX1-202ENST00000376709 PTPN3P26045 913 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 EPHB2P29323 1055 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 SERPINB4P48594 390 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 TSPY1Q01534 308 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 MAPRE1Q15691 268 aaKnown RBP20.76■□□□□ 0.91
VSX1-202ENST00000376709 CYS1Q717R9 158 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 TAC4Q86UU9 113 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 UNC5BQ8IZJ1 945 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 UROC1Q96N76 676 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 TMEM209Q96SK2 561 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 NAT9Q9BTE0 207 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 PCMTD2Q9NV79 361 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 SNX10Q9Y5X0 201 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 ALDH1A2O94788 518 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 ITGB1P05556 798 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 MX2P20592 715 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 BGNP21810 368 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 SERPINB6P35237 376 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 PPIDQ08752 370 aaKnown RBP20.76■□□□□ 0.91
VSX1-202ENST00000376709 CD300LGQ6UXG3 332 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 AGAP3Q96P47 875 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 CD248Q9HCU0 757 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 DCTN4Q9UJW0 460 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 PLLPQ9Y342 182 aa20.76■□□□□ 0.91
VSX1-202ENST00000376709 CNTFP26441 200 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 CCNFP41002 786 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 ZNF135P52742 658 aaPredicted RBP20.75■□□□□ 0.91
VSX1-202ENST00000376709 KCNJ2P63252 427 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 CRYMQ14894 314 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 SNCBQ16143 134 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 LRRTM3Q86VH5 581 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 RAET1EQ8TD07 263 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 ARNTL2Q8WYA1 636 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 TRIM62Q9BVG3 475 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 TRIM55Q9BYV6 548 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 TXLNGQ9NUQ3 528 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 SYBUQ9NX95 663 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 SHROOM3Q8TF72 1996 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 NUP205Q92621 2012 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 HMX2A2RU54 273 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 LRIG2O94898 1065 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 UNC5CO95185 931 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 NQO1P15559 274 aaKnown RBP20.75■□□□□ 0.91
VSX1-202ENST00000376709 SKIV2L2P42285 1042 aaKnown RBP20.75■□□□□ 0.91
VSX1-202ENST00000376709 NDUFAF2Q8N183 169 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 SCAMP5Q8TAC9 235 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 ZNF398Q8TD17 642 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 DQX1Q8TE96 717 aaKnown RBP20.75■□□□□ 0.91
VSX1-202ENST00000376709 PKMYT1Q99640 499 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 BRD8Q9H0E9 1235 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 TRPV6Q9H1D0 765 aa20.75■□□□□ 0.91
VSX1-202ENST00000376709 ARHGEF37A1IGU5 675 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 F8W810 466 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 MTSS1O43312 755 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 MGRN1O60291 552 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 CCNB1P14635 433 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 PAX3P23760 479 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 FAM26DQ5JW98 314 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 DCLRE1AQ6PJP8 1040 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 MARK2Q7KZI7 788 aaKnown RBP20.74■□□□□ 0.91
VSX1-202ENST00000376709 NLRP9Q7RTR0 991 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 KIF2BQ8N4N8 673 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 ARMC2Q8NEN0 867 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 HDAC11Q96DB2 347 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 MKS1Q9NXB0 559 aa20.74■□□□□ 0.91
VSX1-202ENST00000376709 C2CD2LO14523 706 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 CABYRO75952 493 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 POLBP06746 335 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 HOXD10P28358 340 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 GARSP41250 739 aaKnown RBP20.73■□□□□ 0.91
VSX1-202ENST00000376709 SPATA2LQ8IUW3 424 aaPredicted RBP20.73■□□□□ 0.91
VSX1-202ENST00000376709 SUSD3Q96L08 255 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 SLC17A6Q9P2U8 582 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 PTPRDP23468 1912 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 A0A0G2JND7 137 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 SRGAP2BP0DMP2 458 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 YWHAHQ04917 246 aaPredicted RBP20.73■□□□□ 0.91
VSX1-202ENST00000376709 NIPAL4Q0D2K0 466 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 GALNT2Q10471 571 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms