RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 MYL4P12829 197 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 COMMD9Q9P000 198 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 KCNH1O95259 989 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 ADGRF2Q8IZF7 708 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 MLPHQ9BV36 600 aaPredicted RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 ING4Q9UNL4 249 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 PCDHA3Q9Y5H8 950 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 PRR36Q9H6K5 1346 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 IDH3BO43837 385 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 RPL21P46778 160 aaKnown RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 PTDSS1P48651 473 aaKnown RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 CASP4P49662 377 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 GLRA4Q5JXX5 417 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 LIN54Q6MZP7 749 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 FBXO32Q969P5 355 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 ARMCX1Q9P291 453 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 SLC37A4O43826 429 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 ACOT1Q86TX2 421 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 TBCBQ99426 244 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 CISHQ9NSE2 258 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 CYP1A1P04798 512 aaPredicted RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 RASA1P20936 1047 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 RXRBP28702 533 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 NRF1Q16656 503 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 FAM187BQ17R55 369 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 KAT2BQ92831 832 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 MYDGFQ969H8 173 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 VMP1Q96GC9 406 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 TMEM176AQ96HP8 235 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 NT5MQ9NPB1 228 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 TRHDEQ9UKU6 1024 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 MAPRE3Q9UPY8 281 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 ATXN2Q99700 1313 aaKnown RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 NPY2RP49146 381 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 ZSCAN18Q8TBC5 510 aaPredicted RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
SPEN-201ENST00000375759 TMEM216Q9P0N5 145 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 PRKAG3Q9UGI9 489 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 NUDT5Q9UKK9 219 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
SPEN-201ENST00000375759 CBX6O95503 412 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 CTSHP09668 335 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 C6orf222P0C671 652 aaPredicted RBP10.02□□□□□ -0.8
SPEN-201ENST00000375759 ERVK-10P10266 1014 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 DNAJB2P25686 324 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 LHX1P48742 406 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 GRB10Q13322 594 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 ZNF276Q8N554 614 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 ZNF398Q8TD17 642 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 KBTBD13C9JR72 458 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 RENBPP51606 427 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 CYP24A1Q07973 514 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 GNA13Q14344 377 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 AMHR2Q16671 573 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 MARK2Q7KZI7 788 aaKnown RBP10.02□□□□□ -0.8
SPEN-201ENST00000375759 HERC6Q8IVU3 1022 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 WDR12Q9GZL7 423 aaKnown RBP10.02□□□□□ -0.8
SPEN-201ENST00000375759 PLGRKTQ9HBL7 147 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 GPR15P49685 360 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 BNC1Q01954 994 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 FGD3Q5JSP0 725 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 CYP2R1Q6VVX0 501 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 KBTBD8Q8NFY9 601 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 ZFYVE1Q9HBF4 777 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 CDH9Q9ULB4 789 aa10.02□□□□□ -0.8
SPEN-201ENST00000375759 A0A096LPK6 155 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 HACD1B0YJ81 288 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 SEC24AO95486 1093 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 ACO1P21399 889 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 BCAP31P51572 246 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 MRPS22P82650 360 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 RNF43Q68DV7 783 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 MPZL3Q6UWV2 235 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 POU5F2Q8N7G0 328 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 UCMAQ8WVF2 138 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 IFRD1O00458 451 aaPredicted RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 JCHAINP01591 159 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 LRG1P02750 347 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 ACLYP53396 1101 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 NAA20P61599 178 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 SNAPC2Q13487 334 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 EZH2Q15910 746 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 RPS6KA6Q9UK32 745 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 SSNA1O43805 119 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 PECAM1P16284 738 aaPredicted RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 GIT2Q14161 759 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 SNX32Q86XE0 403 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 PALB2Q86YC2 1186 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 PHACTR4Q8IZ21 702 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 RAET1EQ8TD07 263 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 MTIF3Q9H2K0 278 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms