RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 APEX2Q9UBZ4 518 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 EIF2B4Q9UI10 523 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 MTUS1Q9ULD2 1270 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PALD1Q9ULE6 856 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 BTBD3Q9Y2F9 522 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 TMED5Q9Y3A6 229 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PAXBP1Q9Y5B6 917 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PCDHGB5Q9Y5G0 923 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 AK9Q5TCS8 1911 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 XDHP47989 1333 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 RNF103-CHMP3A0A140T963 221 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 BLACEA4D250 179 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 KRT87PA6NCN2 255 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 RNF103O00237 685 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 SH2B2O14492 632 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 WNT9AO14904 365 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 THAP12O43422 761 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CEP104O60308 925 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 TBC1D4O60343 1298 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 BUB1BO60566 1050 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 RTN2O75298 545 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 FGBP02675 491 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PLA2G1BP04054 148 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 RPLP2P05387 115 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ITGB1P05556 798 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 SNRPB2P08579 225 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 SNRPA1P09661 255 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CCDC172P0C7W6 258 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ITGA4P13612 1032 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CD40P25942 277 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 AKT1P31749 480 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PSMB10P40306 273 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 MLH1P40692 756 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 WASP42768 502 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ETV1P50549 477 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 MC1RQ01726 317 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CREMQ03060 361 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 COASYQ13057 564 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PAK1Q13153 545 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 FGL2Q14314 439 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 DLGAP5Q15398 846 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ZNF174Q15697 407 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 SMU1Q2TAY7 513 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 KBTBD12Q3ZCT8 623 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PLEKHN1Q494U1 663 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CTXN3Q4LDR2 81 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 HSP90AA5PQ58FG0 334 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 FAM26FQ5R3K3 315 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CCDC183Q5T5S1 534 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 MFSD14CQ5VZR4 134 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 GTF2IRD2BQ6EKJ0 949 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 NFRKBQ6P4R8 1299 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 KLHL24Q6TFL4 600 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 UNQ6494/PRO21346Q6UXR6 183 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 GBP6Q6ZN66 633 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CEP128Q6ZU80 1094 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 USP53Q70EK8 1073 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 LPCAT2Q7L5N7 544 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 OVCH1Q7RTY7 1134 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ADAT2Q7Z6V5 191 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 GTF2IRD2Q86UP8 949 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 KRT73Q86Y46 540 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ARMC8Q8IUR7 673 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ULK2Q8IYT8 1036 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ZDHHC14Q8IZN3 488 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 TAGAPQ8N103 731 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 LRRC43Q8N309 656 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 POMGNT2Q8NAT1 580 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ZBTB44Q8NCP5 570 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 GMCL1P1Q8NEA9 526 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 IL17RDQ8NFM7 739 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 OR52K1Q8NGK4 314 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 MRPL38Q96DV4 380 aaKnown RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 EPSTI1Q96J88 318 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 PPP1R13BQ96KQ4 1090 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 C1orf74Q96LT6 269 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 SLC6A18Q96N87 628 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 HEPHQ9BQS7 1158 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ZNF341Q9BYN7 854 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 FOXP3Q9BZS1 431 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ZNF304Q9HCX3 659 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 MID1IP1Q9NPA3 183 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 SERINC1Q9NRX5 453 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 POLKQ9UBT6 870 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 IL19Q9UHD0 177 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 FEM1BQ9UK73 627 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 TCFL5Q9UL49 500 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CAMK2AQ9UQM7 478 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 ATP11BQ9Y2G3 1177 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 USP15Q9Y4E8 981 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-204ENST00000375025 LYVE1Q9Y5Y7 322 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 CACNA1GO43497 2377 aa2.42□□□□□ -2.02
CCDC7-204ENST00000375025 A0A0G2JPF8 293 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 GOLGA6L10A0A0M3HER8 536 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SLC15A5A6NIM6 579 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 HNRNPCL3B7ZW38 293 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 O00370 1275 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PGRMC2O15173 223 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms