RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DCDC2Q9UHG0 476 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 ADAM28Q9UKQ2 775 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 PIN4Q9Y237 131 aaKnown RBP14.33□□□□□ -0.12
HMGCL-203ENST00000374490 CEP290O15078 2479 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 FAM237BA0A1B0GVD1 139 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 WDR27A2RRH5 827 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 NCAM2O15394 837 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 MFSD11O43934 449 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 MAGEC1O60732 1142 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 RARBP10826 455 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 NPR3P17342 541 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 ATXN1P54253 815 aaKnown RBP14.32□□□□□ -0.12
HMGCL-203ENST00000374490 PURAQ00577 322 aaKnown RBP14.32□□□□□ -0.12
HMGCL-203ENST00000374490 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
HMGCL-203ENST00000374490 SNX17Q15036 470 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 TAF11Q15544 211 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
HMGCL-203ENST00000374490 SPANXN3Q5MJ09 141 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 CASC4Q6P4E1 433 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 PPP1R14CQ8TAE6 165 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 WNT8BQ93098 351 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 NTAN1Q96AB6 310 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 ZNF570Q96NI8 536 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 HBS1LQ9Y450 684 aaKnown RBP14.32□□□□□ -0.12
HMGCL-203ENST00000374490 HES2Q9Y543 173 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 LRRC42Q9Y546 428 aa14.32□□□□□ -0.12
HMGCL-203ENST00000374490 HMX2A2RU54 273 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 SPTLC1O15269 473 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 SEPT4O43236 478 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 MTSS1O43312 755 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 UGT1A9O60656 530 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 LMO2P25791 158 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 GJA9P57773 515 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 TMEM62Q0P6H9 643 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 ADIGQ0VDE8 80 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 NAA25Q14CX7 972 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 DNAL1Q4LDG9 190 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 TMPRSS6Q8IU80 811 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 ARID3BQ8IVW6 561 aaPredicted RBP14.31□□□□□ -0.12
HMGCL-203ENST00000374490 WDR75Q8IWA0 830 aaKnown RBP14.31□□□□□ -0.12
HMGCL-203ENST00000374490 SIX6OS1Q8N1H7 587 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 NME8Q8N427 588 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 P2RY11Q96G91 374 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 UGT1A7Q9HAW7 530 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 UGT1A10Q9HAW8 530 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 UGT1A8Q9HAW9 530 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 XPNPEP3Q9NQH7 507 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 FBXO6Q9NRD1 293 aaPredicted RBP14.31□□□□□ -0.12
HMGCL-203ENST00000374490 RRN3Q9NYV6 651 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 TAGLN3Q9UI15 199 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 NUMBLQ9Y6R0 609 aa14.31□□□□□ -0.12
HMGCL-203ENST00000374490 ERI2A8K979 691 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 SPECC1L-ADORA2AF8WAN1 911 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 EEF2KO00418 725 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 AKAP5P24588 427 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 GRK2P25098 689 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 BMP8BP34820 402 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 GP5P40197 560 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 HCAR3P49019 387 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 RAP1GDS1P52306 607 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 CRYBB1P53674 252 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 DEUP1Q05D60 604 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 AP1B1Q10567 949 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 SCAPQ12770 1279 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 DPYSQ14117 519 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 DCAF6Q58WW2 860 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 GNASQ5JWF2 1037 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 UBXN11Q5T124 520 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 PDCD7Q8N8D1 485 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 NAF1Q96HR8 494 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 GDF15Q99988 308 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 LPIN3Q9BQK8 851 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 MTG1Q9BT17 334 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 MECRQ9BV79 373 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 NMUR2Q9GZQ4 415 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 UPF3AQ9H1J1 476 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 CDHR5Q9HBB8 845 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 TXNDC16Q9P2K2 825 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 PPARGC1AQ9UBK2 798 aaKnown RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 NKX1-2Q9UD57 310 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 CAPN14A8MX76 684 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 C9IYK1 514 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 SOX1O00570 391 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 HCRTO43612 131 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 POLBP06746 335 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 SERPINA6P08185 405 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 GM2AP17900 193 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 MGAT1P26572 445 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 LILRA4P59901 499 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-203ENST00000374490 CCDC6Q16204 474 aa14.3□□□□□ -0.12
HMGCL-203ENST00000374490 FASTKD1Q53R41 847 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms