RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 CSPG4P5Q96PW8 444 aa13.22□□□□□ -0.29
GJB1-202ENST00000374022 NEU3Q9UQ49 428 aa13.22□□□□□ -0.29
GJB1-202ENST00000374022 WNT6Q9Y6F9 365 aa13.22□□□□□ -0.29
GJB1-202ENST00000374022 COL6A3P12111 3177 aa13.22□□□□□ -0.29
GJB1-202ENST00000374022 IGLV3-10A0A075B6K4 115 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
GJB1-202ENST00000374022 PRLRP16471 622 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 EPHB2P29323 1055 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 HOXC13P31276 330 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 PTPN7P35236 360 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 CHKAP35790 457 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 LLGL1Q15334 1064 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 ANKRD20A8PQ5CZ79 823 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
GJB1-202ENST00000374022 RFX8Q6ZV50 586 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 COG1Q8WTW3 980 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 OSCP1Q8WVF1 389 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 IGSF8Q969P0 613 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 OTUB2Q96DC9 234 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 MYEOVQ96EZ4 313 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 PRICKLE1Q96MT3 831 aaPredicted RBP13.21□□□□□ -0.29
GJB1-202ENST00000374022 RPRD1AQ96P16 312 aaPredicted RBP13.21□□□□□ -0.29
GJB1-202ENST00000374022 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
GJB1-202ENST00000374022 DUS2Q9NX74 493 aaKnown RBP13.21□□□□□ -0.29
GJB1-202ENST00000374022 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
GJB1-202ENST00000374022 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 ANHXE9PGG2 379 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 GFRA2O00451 464 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 CES2O00748 559 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 DAPK3O43293 454 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 CEP104O60308 925 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 TSPAN3O60637 253 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 ECI2O75521 394 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 KRT10P13645 584 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 IL9P15248 144 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 IFNAR2P48551 515 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 HCAR3P49019 387 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 IRAK1P51617 712 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 HTR4Q13639 388 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 DPYSQ14117 519 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 RABGAP1LQ5R372 815 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 KAZNQ674X7 775 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 PCDH19Q8TAB3 1148 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 ASIC4Q96FT7 647 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 RNF157Q96PX1 679 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 OSBPL8Q9BZF1 889 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 PLA2G2FQ9BZM2 168 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 ARHGEF4Q9NR80 690 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.3
GJB1-202ENST00000374022 PPARGC1AQ9UBK2 798 aaKnown RBP13.21□□□□□ -0.3
GJB1-202ENST00000374022 NUMBLQ9Y6R0 609 aa13.21□□□□□ -0.3
GJB1-202ENST00000374022 NYNRINQ9P2P1 1898 aaKnown RBP13.21□□□□□ -0.3
GJB1-202ENST00000374022 KIAA1549LQ6ZVL6 1849 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 ZNF185O15231 689 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 PSMC3P17980 439 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 AMPD1P23109 780 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 SGSHP51688 502 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 TUBB2AQ13885 445 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 GRM2Q14416 872 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 C5orf22Q49AR2 442 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 RFX6Q8HWS3 928 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 YAF2Q8IY57 180 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 HJURPQ8NCD3 748 aaPredicted RBP13.2□□□□□ -0.3
GJB1-202ENST00000374022 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
GJB1-202ENST00000374022 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 TUBB2BQ9BVA1 445 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 MAK16Q9BXY0 300 aaKnown RBP13.2□□□□□ -0.3
GJB1-202ENST00000374022 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 MPP6Q9NZW5 540 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 STIM2Q9P246 746 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
GJB1-202ENST00000374022 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
GJB1-202ENST00000374022 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 TYW5A2RUC4 315 aaKnown RBP13.19□□□□□ -0.3
GJB1-202ENST00000374022 DRGXA6NNA5 263 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 FGF10O15520 208 aaPredicted RBP13.19□□□□□ -0.3
GJB1-202ENST00000374022 ERCC2P18074 760 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 RPS24P62847 133 aaKnown RBP13.19□□□□□ -0.3
GJB1-202ENST00000374022 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
GJB1-202ENST00000374022 ELF2Q15723 593 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 EML3Q32P44 896 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 ALFQ53S48 1182 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 TTC39BQ5VTQ0 682 aaPredicted RBP13.19□□□□□ -0.3
GJB1-202ENST00000374022 TRIM68Q6AZZ1 485 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 TPGS1Q6ZTW0 290 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
GJB1-202ENST00000374022 ZDHHC14Q8IZN3 488 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 RASGEF1CQ8N431 466 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 PQLC3Q8N755 202 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 MS4A14Q96JA4 679 aa13.19□□□□□ -0.3
GJB1-202ENST00000374022 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms