RNA–Protein interactions for RNA: ENST00000373821.6

SRPK1-203, Transcript of SRSF protein kinase 1, humanhuman

TSL 5

Gene SRPK1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-203ENST00000373821 LMTK3Q96Q04 1460 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 A0A087WWL8 130 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 CLIC1O00299 241 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 PODXLO00592 558 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 TBC1D4O60343 1298 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 FAM155BO75949 473 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 GFPT2O94808 682 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 TBX18O95935 607 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 TBXAS1P24557 533 aaPredicted RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 PRKAA2P54646 552 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 SLC13A2Q13183 592 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 CUL4BQ13620 913 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 ZIK1Q3SY52 487 aaPredicted RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 ARMC3Q5W041 872 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 RAP1GAP2Q684P5 730 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 CAPRIN2Q6IMN6 1127 aaKnown RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 ZNF280DQ6N043 979 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 LRRTM4Q86VH4 590 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 FTSJ3Q8IY81 847 aaKnown RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 SCAMP5Q8TAC9 235 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 FAM71BQ8TC56 605 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 SMCR8Q8TEV9 937 aaPredicted RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 RAPGEF4Q8WZA2 1011 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 IQCDQ96DY2 449 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 RRP36Q96EU6 259 aaKnown RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 VPS50Q96JG6 964 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 PPP1R9BQ96SB3 815 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 NTPCRQ9BSD7 190 aaKnown RBP3.17□□□□□ -1.9
SRPK1-203ENST00000373821 TUBB6Q9BUF5 446 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 SLC26A6Q9BXS9 759 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 ZCWPW1Q9H0M4 648 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 UBN1Q9NPG3 1134 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 RIC8AQ9NPQ8 531 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 ARL8BQ9NVJ2 186 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 TMEM45AQ9NWC5 275 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 RGL1Q9NZL6 768 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 KIF17Q9P2E2 1029 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 LPAR3Q9UBY5 353 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 POLG2Q9UHN1 485 aa3.17□□□□□ -1.9
SRPK1-203ENST00000373821 CLCA1A8K7I4 914 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 CYSRT1A8MQ03 144 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 PYCARD-AS1I3L0S3 204 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 CCER2I3L3R5 266 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 ACOT8O14734 319 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 ASNA1O43681 348 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 SLC28A2O43868 658 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 SRGAP2O75044 1071 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 RASAL1O95294 804 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 NGFRP08138 427 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 ITGA5P08648 1049 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 TXNP10599 105 aaKnown RBP3.16□□□□□ -1.9
SRPK1-203ENST00000373821 BTF3P20290 206 aaKnown RBP3.16□□□□□ -1.9
SRPK1-203ENST00000373821 CARSP49589 748 aaKnown RBP3.16□□□□□ -1.9
SRPK1-203ENST00000373821 SLC12A2P55011 1212 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 YPEL5P62699 121 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 SEC23BQ15437 767 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 TAF12Q16514 161 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 ST3GAL2Q16842 350 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 FBXO47Q5MNV8 452 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 CACHD1Q5VU97 1274 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 PELI3Q8N2H9 469 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 C12orf76Q8N812 135 aaPredicted RBP3.16□□□□□ -1.9
SRPK1-203ENST00000373821 DNAJB14Q8TBM8 379 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 BCAS4Q8TDM0 211 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 CSGALNACT1Q8TDX6 532 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 HTRA1Q92743 480 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 ATP2A3Q93084 1043 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 TRIM63Q969Q1 353 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 SUCLG2Q96I99 432 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 CHCHD6Q9BRQ6 235 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 KATNAL1Q9BW62 490 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.16□□□□□ -1.94e-7■□□□□ 10.4
SRPK1-203ENST00000373821 TMEM8AQ9HCN3 771 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 WASH6PQ9NQA3 447 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 SMYD2Q9NRG4 433 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 ZBTB40Q9NUA8 1239 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 TMEM160Q9NX00 188 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 MDFICQ9P1T7 246 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 NKX1-2Q9UD57 310 aaPredicted RBP3.16□□□□□ -1.9
SRPK1-203ENST00000373821 MID2Q9UJV3 735 aa3.16□□□□□ -1.9
SRPK1-203ENST00000373821 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.15□□□□□ -1.91
SRPK1-203ENST00000373821 F8W810 466 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 HNRNPDLO14979 420 aaKnown RBP3.15□□□□□ -1.91
SRPK1-203ENST00000373821 HOXC11O43248 304 aaPredicted RBP3.15□□□□□ -1.91
SRPK1-203ENST00000373821 CTIFO43310 598 aaKnown RBP3.15□□□□□ -1.91
SRPK1-203ENST00000373821 KCNQ3O43525 872 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 PECAM1P16284 738 aaPredicted RBP3.15□□□□□ -1.91
SRPK1-203ENST00000373821 ADD2P35612 726 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 TIRAPP58753 221 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 TXNL4AP83876 142 aaKnown RBP3.15□□□□□ -1.91
SRPK1-203ENST00000373821 SLC14A1Q13336 389 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 FHL3Q13643 280 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 C9orf50Q5SZB4 431 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 SLC9C2Q5TAH2 1124 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 CCDC30Q5VVM6 783 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 GSG1LQ6UXU4 331 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 FAM57BQ71RH2 274 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 RNF44Q7L0R7 432 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 BEND5Q7L4P6 421 aa3.15□□□□□ -1.91
SRPK1-203ENST00000373821 TRAPPC11Q7Z392 1133 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms