RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TIGD5Q53EQ6 642 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 TEX44Q53QW1 395 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 GRTP1Q5TC63 336 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 ANKRD22Q5VYY1 191 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 BSPRYQ5W0U4 402 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 MSANTD2Q6P1R3 559 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 CAND1Q86VP6 1230 aaKnown RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM131BQ86XD5 332 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 COLGALT1Q8NBJ5 622 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC7A14Q8TBB6 771 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 SPPL2BQ8TCT7 592 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 MZB1Q8WU39 189 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 STON2Q8WXE9 905 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 OVCA2Q8WZ82 227 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 PEX13Q92968 403 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 ACSF2Q96CM8 615 aaPredicted RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 P2RY11Q96G91 374 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 PIWIL1Q96J94 861 aaKnown RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM193BQ96PV7 902 aaPredicted RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 RAB3IPQ96QF0 476 aaPredicted RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM118BQ9BPY3 351 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 ELAC2Q9BQ52 826 aaKnown RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 PRKD2Q9BZL6 878 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 CRISPLD2Q9H0B8 497 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 SMOC2Q9H3U7 446 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 TRPC7Q9HCX4 862 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 HMX1Q9NP08 348 aaPredicted RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 NMRK2Q9NPI5 230 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 IL37Q9NZH6 218 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 OR12D3Q9UGF7 316 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 TBK1Q9UHD2 729 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC12A4Q9UP95 1085 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 SCML2Q9UQR0 700 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM237BA0A1B0GVD1 139 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM92AA1XBS5 289 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MYBPHLA2RUH7 354 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 I3L4J1 428 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 RNF103O00237 685 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 C2CD2LO14523 706 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 TIMM44O43615 452 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 USP1O94782 785 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PGK1P00558 417 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MYL4P12829 197 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 HOXB8P17481 243 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 ERCC2P18074 760 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 AMPD1P23109 780 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 GRK2P25098 689 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 TKTP29401 623 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CD52P31358 61 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 SPRP35270 261 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PPP3CCP48454 512 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 NDST2P52849 883 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CSE1LP55060 971 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 GBE1Q04446 702 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PRKCZQ05513 592 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 RING1Q06587 406 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MGAT5Q09328 741 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 AP1B1Q10567 949 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CDH17Q12864 832 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC14A2Q15849 920 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PKN2Q16513 984 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CA9Q16790 459 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 KBTBD12Q3ZCT8 623 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CCDC153Q494R4 210 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 GALNTL6Q49A17 601 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 NOMO2Q5JPE7 1267 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 BTBD8Q5XKL5 378 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM91A1Q658Y4 838 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 FOXR1Q6PIV2 292 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 NLRP9Q7RTR0 991 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 ANKMY2Q8IV38 441 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CCDC185Q8N715 623 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CCNYQ8ND76 341 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 ZNF75CPQ92670 426 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 INPP5DQ92835 1189 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MYLPFQ96A32 169 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 SPATA17Q96L03 361 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 TEKT5Q96M29 485 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 C7orf26Q96N11 449 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 TMEM237Q96Q45 408 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 LRRC37BQ96QE4 947 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 CPNE1Q99829 537 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 TRIM55Q9BYV6 548 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 ADAM33Q9BZ11 813 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 ZCWPW1Q9H0M4 648 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 GBA3Q9H227 469 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MANSC1Q9H8J5 431 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 AGO3Q9H9G7 860 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 GOLGA2P5Q9HBQ8 144 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 MRM3Q9HC36 420 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 ENTPD7Q9NQZ7 604 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 VPS45Q9NRW7 570 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PIGVQ9NUD9 493 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 SAGE1Q9NXZ1 904 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PHTF1Q9UMS5 762 aa8.95□□□□□ -0.98
SNRNP40-202ENST00000373720 PHF24Q9UPV7 400 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms