RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LRRC38Q5VT99 294 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 ABRAXAS1Q6UWZ7 409 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 USP43Q70EL4 1123 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 NPAS4Q8IUM7 802 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 COLGALT2Q8IYK4 626 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 NKAIN3Q8N8D7 197 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 ATP13A1Q9HD20 1204 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 TXLNGQ9NUQ3 528 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 PAQR5Q9NXK6 330 aaPredicted RBP8.45□□□□□ -1.06
GARNL3-201ENST00000373386 ADAM22Q9P0K1 906 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 EPS15L1Q9UBC2 864 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 SLC7A8Q9UHI5 535 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 TEKT2Q9UIF3 430 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 ERVK-11Q9UQG0 969 aa8.45□□□□□ -1.06
GARNL3-201ENST00000373386 KIAA1217Q5T5P2 1943 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 LCTP09848 1927 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 FUOMA2VDF0 154 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 SPATA31C2B4DYI2 1134 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 H7C0C1 242 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 CDH16O75309 829 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ATP5HO75947 161 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 C4BPAP04003 597 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 GSTM1P09488 218 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ATF2P15336 505 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 VCLP18206 1134 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 IVDP26440 423 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 MAPK4P31152 587 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 BCAP31P51572 246 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RAD23BP54727 409 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 FUT11Q495W5 492 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 XKR3Q5GH77 459 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 LIN9Q5TKA1 542 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ABHD15Q6UXT9 468 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 HID1Q8IV36 788 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 FITM2Q8N6M3 262 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 DTX3Q8N9I9 347 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 TAS1R2Q8TE23 839 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 UCMAQ8WVF2 138 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 KAT5Q92993 513 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 GHITMQ9H3K2 345 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 MARCH7Q9H992 704 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 CYP26B1Q9NR63 512 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 TRPM5Q9NZQ8 1165 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 GGT7Q9UJ14 662 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 COQ6Q9Y2Z9 468 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 MROH7Q68CQ1 1323 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 GOLGA8QA0A0J9YX86 632 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 GOLGA8OA6NCC3 632 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 GOLGA8NF8WBI6 632 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 XPO1O14980 1071 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RAD51BO15315 384 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 CLDN3O15551 220 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RAD17O75943 681 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 CAPN1P07384 714 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 NR3C2P08235 984 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 PABPC4LP0CB38 370 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ACO1P21399 889 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 CD86P42081 329 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 NAMPTP43490 491 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 HSPA13P48723 471 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ITGA8P53708 1063 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 IL9RQ01113 521 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 TAP1Q03518 808 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 NR1H3Q13133 447 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RCN2Q14257 317 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ALFQ53S48 1182 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 DCAF15Q66K64 600 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 PLEKHA7Q6IQ23 1121 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 MARK2Q7KZI7 788 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RHOT1Q8IXI2 618 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RBBP8NLQ8NC74 664 aaPredicted RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 OR52K2Q8NGK3 314 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 CFAP61Q8NHU2 1237 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ENKURQ8TC29 256 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 FNIP1Q8TF40 1166 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 C1orf54Q8WWF1 131 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 POMGNT1Q8WZA1 660 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 FRMD8P1Q9BZ68 369 aaPredicted RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 DCLK3Q9C098 648 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 ARNT2Q9HBZ2 717 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 RAVER2Q9HCJ3 691 aaKnown RBP8.44□□□□□ -1.06
GARNL3-201ENST00000373386 STK38LQ9Y2H1 464 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 STON1Q9Y6Q2 735 aa8.44□□□□□ -1.06
GARNL3-201ENST00000373386 WDR90Q96KV7 1748 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 IGKV6D-21A0A0A0MT36 114 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 UNC5CO95185 931 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 LSM8O95777 96 aaKnown RBP8.43□□□□□ -1.06
GARNL3-201ENST00000373386 GUCA1CO95843 209 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 ATP5BP06576 529 aaKnown RBP8.43□□□□□ -1.06
GARNL3-201ENST00000373386 CREB1P16220 341 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 EIF2AK2P19525 551 aaKnown RBP8.43□□□□□ -1.06
GARNL3-201ENST00000373386 CBLBQ13191 982 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 RFTN1Q14699 578 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-201ENST00000373386 STAT4Q14765 748 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 CCDC58Q4VC31 144 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 KCNT1Q5JUK3 1230 aa8.43□□□□□ -1.06
GARNL3-201ENST00000373386 KIAA1841Q6NSI8 718 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms