RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PDK1Q15118 436 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 FSCN1Q16658 493 aaKnown RBP24.46■■□□□ 1.51
CDK9-201ENST00000373264 FASTKD1Q53R41 847 aaKnown RBP24.46■■□□□ 1.51
CDK9-201ENST00000373264 CMC1Q7Z7K0 106 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 KCTD13Q8WZ19 329 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 ZNF778Q96MU6 729 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 TLE6Q9H808 572 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 DDIT4Q9NX09 232 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 TAS2R1Q9NYW7 299 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 KLHL8Q9P2G9 620 aaPredicted RBP24.46■■□□□ 1.51
CDK9-201ENST00000373264 RCOR3Q9P2K3 495 aaPredicted RBP24.46■■□□□ 1.51
CDK9-201ENST00000373264 ST3GAL5Q9UNP4 418 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 CDY2AQ9Y6F7 541 aa24.46■■□□□ 1.51
CDK9-201ENST00000373264 CCDC78A2IDD5 438 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 PRKCGP05129 697 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 PTPN3P26045 913 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 CPT1AP50416 773 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 RASSF2P50749 326 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 SARNPP82979 210 aaKnown RBP24.45■■□□□ 1.51
CDK9-201ENST00000373264 KHDC1Q4VXA5 237 aaKnown RBP24.45■■□□□ 1.51
CDK9-201ENST00000373264 MARK2Q7KZI7 788 aaKnown RBP24.45■■□□□ 1.51
CDK9-201ENST00000373264 HASPINQ8TF76 798 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 C7orf26Q96N11 449 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 BTBD10Q9BSF8 475 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 AP5M1Q9H0R1 490 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 RNPEPL1Q9HAU8 725 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 PPARGC1AQ9UBK2 798 aaKnown RBP24.45■■□□□ 1.51
CDK9-201ENST00000373264 RPS6KL1Q9Y6S9 549 aa24.45■■□□□ 1.51
CDK9-201ENST00000373264 GSC2O15499 205 aa24.45■■□□□ 1.5
CDK9-201ENST00000373264 SCNN1GP51170 649 aa24.45■■□□□ 1.5
CDK9-201ENST00000373264 IFRD2Q12894 506 aaPredicted RBP24.45■■□□□ 1.5
CDK9-201ENST00000373264 PAFAH1B3Q15102 231 aaKnown RBP24.45■■□□□ 1.5
CDK9-201ENST00000373264 AGAP2Q99490 1192 aa24.45■■□□□ 1.5
CDK9-201ENST00000373264 MKS1Q9NXB0 559 aa24.45■■□□□ 1.5
CDK9-201ENST00000373264 SCN4AP35499 1836 aa24.45■■□□□ 1.5
CDK9-201ENST00000373264 EIF4E1BA6NMX2 242 aaKnown RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 ZBTB24O43167 697 aaPredicted RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 SNNO75324 88 aaPredicted RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 ENO1P06733 434 aaKnown RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 PGAM1P18669 254 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 ARRB2P32121 409 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 ELF1P32519 619 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 ZBTB17Q13105 803 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 RASSF3Q86WH2 238 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 HBS1LQ9Y450 684 aaKnown RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 GYG2O15488 501 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 ITGA2BP08514 1039 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 C6orf222P0C671 652 aaPredicted RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 TPBGLP0DKB5 382 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 SPDYAQ5MJ70 313 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 BHLHA9Q7RTU4 235 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 HACE1Q8IYU2 909 aa24.44■■□□□ 1.5
CDK9-201ENST00000373264 CELF6Q96J87 481 aaKnown RBP24.44■■□□□ 1.5
CDK9-201ENST00000373264 CCDC22O60826 627 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 WFS1O76024 890 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 STK10O94804 968 aaKnown RBP24.43■■□□□ 1.5
CDK9-201ENST00000373264 TOMM70O94826 608 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 ESRRAP11474 423 aaPredicted RBP24.43■■□□□ 1.5
CDK9-201ENST00000373264 MLNP12872 115 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 TPH1P17752 444 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 GNAZP19086 355 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 CD68P34810 354 aaPredicted RBP24.43■■□□□ 1.5
CDK9-201ENST00000373264 SERPINB9P50453 376 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 ALDH18A1P54886 795 aaKnown RBP24.43■■□□□ 1.5
CDK9-201ENST00000373264 TPI1P60174 286 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 RCN2Q14257 317 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 CXCL17Q6UXB2 119 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 C4orf50Q6ZRC1 276 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 C2orf69Q8N8R5 385 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 WDR60Q8WVS4 1066 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 FAM105AQ9NUU6 356 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 GOLGA8TH3BQL2 631 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 IL1BP01584 269 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 SEMA3BQ13214 749 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 STX3Q13277 289 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 UBAP2LQ14157 1087 aaKnown RBP24.43■■□□□ 1.5
CDK9-201ENST00000373264 CERCAMQ5T4B2 595 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 ATG16L1Q676U5 607 aa24.43■■□□□ 1.5
CDK9-201ENST00000373264 BZW1Q7L1Q6 419 aaKnown RBP24.43■■□□□ 1.5
CDK9-201ENST00000373264 PPP1R12AO14974 1030 aaPredicted RBP24.42■■□□□ 1.5
CDK9-201ENST00000373264 CALB2P22676 271 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 PDE1BQ01064 536 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 MBLAC2Q68D91 279 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 TIFABQ6ZNK6 161 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 ACVR1CQ8NER5 493 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 CAB39LQ9H9S4 337 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 TMEM216Q9P0N5 145 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 ZFATQ9P243 1243 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 ARL5CA6NH57 179 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 HHLA1C9JL84 531 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 F8W810 466 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 FGF3P11487 239 aaPredicted RBP24.42■■□□□ 1.5
CDK9-201ENST00000373264 KDSRQ06136 332 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 KPNB1Q14974 876 aaKnown RBP24.42■■□□□ 1.5
CDK9-201ENST00000373264 DLG2Q15700 870 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 TIGD5Q53EQ6 642 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 PSTKQ8IV42 348 aaKnown RBP24.42■■□□□ 1.5
CDK9-201ENST00000373264 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.42■■□□□ 1.5
CDK9-201ENST00000373264 ZNF669Q96BR6 464 aaPredicted RBP24.42■■□□□ 1.5
CDK9-201ENST00000373264 MFSD3Q96ES6 412 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms