RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 TMA16Q96EY4 203 aaKnown RBP18.18■□□□□ 0.5
VPS37B-202ENST00000371248 CARD9Q9H257 536 aa18.18■□□□□ 0.5
VPS37B-202ENST00000371248 MPP6Q9NZW5 540 aa18.18■□□□□ 0.5
VPS37B-202ENST00000371248 SNX12Q9UMY4 172 aa18.18■□□□□ 0.5
VPS37B-202ENST00000371248 CDKN2BP42772 138 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 ZNF135P52742 658 aaPredicted RBP18.17■□□□□ 0.5
VPS37B-202ENST00000371248 EML3Q32P44 896 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 ANKRD20A8PQ5CZ79 823 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 RABGAP1LQ5R372 815 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 PAPD7Q5XG87 772 aaKnown RBP18.17■□□□□ 0.5
VPS37B-202ENST00000371248 RFX8Q6ZV50 586 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 TMEM25Q86YD3 366 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 BHMTQ93088 406 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 PRICKLE1Q96MT3 831 aaPredicted RBP18.17■□□□□ 0.5
VPS37B-202ENST00000371248 CSPG4P5Q96PW8 444 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 OSBPL9Q96SU4 736 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 FAM83CQ9BQN1 747 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 ZNF670Q9BS34 389 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 TRMT61BQ9BVS5 477 aaKnown RBP18.17■□□□□ 0.5
VPS37B-202ENST00000371248 KCNK12Q9HB15 430 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 STIM2Q9P246 746 aa18.17■□□□□ 0.5
VPS37B-202ENST00000371248 TCF20Q9UGU0 1960 aaKnown RBP18.16■□□□□ 0.5
VPS37B-202ENST00000371248 IGLV3-10A0A075B6K4 115 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 DRGXA6NNA5 263 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 GDI1P31150 447 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 HCAR3P49019 387 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 IRAK1P51617 712 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 COPS2P61201 443 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 RPS24P62847 133 aaKnown RBP18.16■□□□□ 0.5
VPS37B-202ENST00000371248 TFDP3Q5H9I0 405 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 DDI1Q8WTU0 396 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 ZYG11BQ9C0D3 744 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 EBF3Q9H4W6 596 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 SPHK2Q9NRA0 654 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 RCOR3Q9P2K3 495 aaPredicted RBP18.16■□□□□ 0.5
VPS37B-202ENST00000371248 PPARGC1AQ9UBK2 798 aaKnown RBP18.16■□□□□ 0.5
VPS37B-202ENST00000371248 NEU3Q9UQ49 428 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 NUP205Q92621 2012 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 GFRA2O00451 464 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 TBL1XO60907 577 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 CNTN5O94779 1100 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 KRT10P13645 584 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 AMPD1P23109 780 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 CETN2P41208 172 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 C5orf22Q49AR2 442 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 MPPE1Q53F39 396 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 ALFQ53S48 1182 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 LY6G5CQ5SRR4 150 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 SEL1L2Q5TEA6 688 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 KAZNQ674X7 775 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 CIR1Q86X95 450 aaPredicted RBP18.16■□□□□ 0.5
VPS37B-202ENST00000371248 IRF7Q92985 503 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 RNF157Q96PX1 679 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 HEMGNQ9BXL5 484 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 MAK16Q9BXY0 300 aaKnown RBP18.16■□□□□ 0.5
VPS37B-202ENST00000371248 PLK2Q9NYY3 685 aa18.16■□□□□ 0.5
VPS37B-202ENST00000371248 TYW5A2RUC4 315 aaKnown RBP18.15■□□□□ 0.5
VPS37B-202ENST00000371248 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 CHADO15335 359 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 CYBBP04839 570 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 ARSAP15289 507 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 HTR7P34969 479 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 PDGFRLQ15198 375 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 TAZQ16635 292 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 ANO4Q32M45 955 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 RHBDF2Q6PJF5 856 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 VSIG1Q86XK7 387 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 PCDH19Q8TAB3 1148 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 FAF2Q96CS3 445 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 P2RY11Q96G91 374 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 PBKQ96KB5 322 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 OSBPL8Q9BZF1 889 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 ARHGEF4Q9NR80 690 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 IGSF9Q9P2J2 1179 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 SAR1BQ9Y6B6 198 aa18.15■□□□□ 0.5
VPS37B-202ENST00000371248 hCG_1818297A0A087WSY0 165 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 CEP104O60308 925 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 ASGR2P07307 311 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 PRLRP16471 622 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 ERCC2P18074 760 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 HOXC13P31276 330 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 TNK2Q07912 1038 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 DPYSQ14117 519 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 DHCR24Q15392 516 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 RFX6Q8HWS3 928 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 HJURPQ8NCD3 748 aaPredicted RBP18.14■□□□□ 0.5
VPS37B-202ENST00000371248 ATP2A3Q93084 1043 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 NXPE3Q969Y0 559 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 CATSPERBQ9H7T0 1116 aa18.14■□□□□ 0.5
VPS37B-202ENST00000371248 ZNF487B1APH4 448 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 FGF10O15520 208 aaPredicted RBP18.14■□□□□ 0.49
VPS37B-202ENST00000371248 NFATC1O95644 943 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 TCP1P17987 556 aaKnown RBP18.14■□□□□ 0.49
VPS37B-202ENST00000371248 PPP2R5EQ16537 467 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 FYB2Q5VWT5 728 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 TFAP2DQ7Z6R9 452 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 ADHFE1Q8IWW8 467 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 SLC44A3Q8N4M1 653 aa18.14■□□□□ 0.49
VPS37B-202ENST00000371248 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.14■□□□□ 0.49
VPS37B-202ENST00000371248 COG1Q8WTW3 980 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms