RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CBX6O95503 412 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ETS1P14921 441 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 MLH1P40692 756 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 MMP13P45452 471 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 TAS2R40P59535 323 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ATP6AP1LQ52LC2 224 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 EEF1DP3Q658K8 133 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 LRRC49Q8IUZ0 686 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 STK32AQ8WU08 396 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 PCDHB18PQ96TA0 734 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 AP4S1Q9Y587 144 aa12.11□□□□□ -0.47
DEPDC1-201ENST00000370966 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 XPO1O14980 1071 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 UNC5CO95185 931 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CCNE2O96020 404 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ZFP1Q6P2D0 407 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 TBL1YQ9BQ87 522 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 RGS18Q9NS28 235 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ARHGAP28Q9P2N2 729 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ADAM28Q9UKQ2 775 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 MED1Q15648 1581 aaPredicted RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 KDM4FA0A1W2PPD8 638 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 M0R3G1 203 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 USP1O94782 785 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 SERPIND1P05546 499 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 USP17L7P0C7H9 530 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 DRD4P21917 467 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 GRM5P41594 1212 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 EPHB3P54753 998 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 SLC20A2Q08357 652 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 NEPROQ6NW34 567 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 PRMT9Q6P2P2 845 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ARCQ7LC44 396 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 BHMTQ93088 406 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 C10orf88Q9H8K7 445 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF23P17027 643 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ATP4AP20648 1035 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 BDNFP23560 247 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 NUP107P57740 925 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ENPEPQ07075 957 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ZBTB49Q6ZSB9 765 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CARNMT1Q8N4J0 409 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 PHF21BQ96EK2 531 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 C15orf41Q9Y2V0 281 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 NR5A2O00482 541 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CSE1LP55060 971 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 XRCC4Q13426 336 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF284Q2VY69 593 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 GALNTL6Q49A17 601 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 PCID2Q5JVF3 399 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 WSCD1Q658N2 575 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CES3Q6UWW8 571 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 TMC7Q7Z402 723 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ADCK1Q86TW2 530 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 PALB2Q86YC2 1186 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 PLD3Q8IV08 490 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 TMCO5AQ8N6Q1 288 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 HELQQ8TDG4 1101 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CERS2Q96G23 380 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 TMEM237Q96Q45 408 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 PPP1R10Q96QC0 940 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 EBNA1BP2Q99848 306 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 ATP13A1Q9HD20 1204 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CROTQ9UKG9 612 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 CDH9Q9ULB4 789 aa12.1□□□□□ -0.47
DEPDC1-201ENST00000370966 NCF1BA6NI72 391 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 NCF1CA8MVU1 366 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 KRT6AP02538 564 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 KRT6BP04259 564 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 NCF1P14598 390 aaPredicted RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ME2P23368 584 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 CHKAP35790 457 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 KRT6CP48668 564 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 TUFMP49411 452 aaKnown RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 DAB2P98082 770 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 LRRC57Q8N9N7 239 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 LENG9Q96B70 501 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 MBOAT7Q96N66 472 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 PRDM12Q9H4Q4 367 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 PIH1D1Q9NWS0 290 aaKnown RBP12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 SEPT3Q9UH03 358 aa12.09□□□□□ -0.47
DEPDC1-201ENST00000370966 V9GYQ6 96 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms