RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SCARA3Q6AZY7 606 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 BTN2A2Q8WVV5 523 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 THG1LQ9NWX6 298 aaKnown RBP20.07■□□□□ 0.8
LMO4-202ENST00000370544 SLC15A5A6NIM6 579 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 RRM2P31350 389 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 CAPZA2P47755 286 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 TBL3Q12788 808 aaKnown RBP20.07■□□□□ 0.8
LMO4-202ENST00000370544 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 SLC9A9Q8IVB4 645 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 CDT1Q9H211 546 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 TRDMT1O14717 391 aaKnown RBP20.07■□□□□ 0.8
LMO4-202ENST00000370544 NPR3P17342 541 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 TNFSF9P41273 254 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 AMPD2Q01433 879 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 PLCL1Q15111 1095 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 SPDYCQ5MJ68 293 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 CXCL17Q6UXB2 119 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 KCTD14Q9BQ13 255 aaPredicted RBP20.07■□□□□ 0.8
LMO4-202ENST00000370544 TSEN34Q9BSV6 310 aaKnown RBP20.07■□□□□ 0.8
LMO4-202ENST00000370544 KRCC1Q9NPI7 259 aaPredicted RBP20.07■□□□□ 0.8
LMO4-202ENST00000370544 MPP6Q9NZW5 540 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 NUDT5Q9UKK9 219 aa20.07■□□□□ 0.8
LMO4-202ENST00000370544 ZNF143P52747 638 aaPredicted RBP20.06■□□□□ 0.8
LMO4-202ENST00000370544 SLC45A4Q5BKX6 768 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 PRAMEF19Q5SWL8 479 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 MICU2Q8IYU8 434 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 MED8Q96G25 268 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 NCANO14594 1321 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 KATNA1O75449 491 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 ZNF682O95780 498 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 SKIV2L2P42285 1042 aaKnown RBP20.06■□□□□ 0.8
LMO4-202ENST00000370544 CENPAP49450 140 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 TMEM159Q96B96 161 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 FGF10O15520 208 aaPredicted RBP20.06■□□□□ 0.8
LMO4-202ENST00000370544 SLURP2P0DP57 97 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 PPM1LQ5SGD2 360 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 TRMT11Q7Z4G4 463 aaKnown RBP20.06■□□□□ 0.8
LMO4-202ENST00000370544 ZNF513Q8N8E2 541 aaPredicted RBP20.06■□□□□ 0.8
LMO4-202ENST00000370544 NFKBIZQ9BYH8 718 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 DDX28Q9NUL7 540 aaKnown RBP20.06■□□□□ 0.8
LMO4-202ENST00000370544 TBC1D23Q9NUY8 699 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 TRIM17Q9Y577 477 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 ZSCAN5DPP0CG00 497 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 BMP6P22004 513 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 EVX2Q03828 476 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 PCBP1Q15365 356 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■■■□□ 15.9
LMO4-202ENST00000370544 SERAC1Q96JX3 654 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 MARCH2Q9P0N8 246 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 TMCC3Q9ULS5 477 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 HES2Q9Y543 173 aa20.06■□□□□ 0.8
LMO4-202ENST00000370544 TMEM114B3SHH9 223 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 ATP6V1B2P21281 511 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 SLC16A1P53985 500 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 BCL2L1Q07817 233 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 PHKG1Q16816 387 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 DEFB107AQ8IZN7 70 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 KYQ8NBH2 561 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 NDEL1Q9GZM8 345 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 POLR1EQ9GZS1 481 aaKnown RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 DCLRE1BQ9H816 532 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 CDHR5Q9HBB8 845 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 PARVBQ9HBI1 364 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 MID1IP1Q9NPA3 183 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 PDP2Q9P2J9 529 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 OR12D3Q9UGF7 316 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 NPNTQ6UXI9 565 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 FAM120BQ96EK7 910 aaKnown RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 SEPT3Q9UH03 358 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 PADI4Q9UM07 663 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 XYLBO75191 536 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 IFNA14P01570 189 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 OR56A5P0C7T3 313 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 DGKZQ13574 1117 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 PWP1Q13610 501 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 GPR142Q7Z601 462 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 PPP1R13LQ8WUF5 828 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 EPHB6O15197 1021 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 CHADO15335 359 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 USP12O75317 370 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 SPATA31C1P0DKV0 1188 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 EIF2B5Q13144 721 aaKnown RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 MAD2L1Q13257 205 aaPredicted RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 BOP1Q14137 746 aaKnown RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 LRRC39Q96DD0 335 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 OXNAD1Q96HP4 312 aaPredicted RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 WDR41Q9HAD4 459 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 SAE1Q9UBE0 346 aaPredicted RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 ATP9AO75110 1047 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 CYP2A6P11509 494 aaPredicted RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 KPNB1Q14974 876 aaKnown RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 LRRC38Q5VT99 294 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 C10orf53Q8N6V4 93 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 C18orf25Q96B23 403 aaPredicted RBP20.05■□□□□ 0.8
LMO4-202ENST00000370544 PGM2Q96G03 612 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 SIKE1Q9BRV8 207 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 DPY30Q9C005 99 aa20.05■□□□□ 0.8
LMO4-202ENST00000370544 GSNP06396 782 aa20.04■□□□□ 0.8
LMO4-202ENST00000370544 PSMC3P17980 439 aa20.04■□□□□ 0.8
LMO4-202ENST00000370544 ITGB5P18084 799 aa20.04■□□□□ 0.8
LMO4-202ENST00000370544 TGM3Q08188 693 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms